RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 ALG8Q9BVK2 526 aa14.28□□□□□ -0.12
PCF11-206ENST00000533018 TAS2R3Q9NYW6 316 aa14.28□□□□□ -0.12
PCF11-206ENST00000533018 GMPPBQ9Y5P6 360 aa14.28□□□□□ -0.12
PCF11-206ENST00000533018 ODAMA1E959 279 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 OR4C45A6NMZ5 311 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 PIN1P1O15428 100 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 MT-ND2P03891 347 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 NFYBP25208 207 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 LMO1P25800 156 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 CEACAM3P40198 252 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 PRRX1P54821 245 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 BDH1Q02338 343 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 FBLN7Q53RD9 439 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 C16orf82Q7Z2V1 217 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 REC114Q7Z4M0 266 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 SERPINA12Q8IW75 414 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 CHST4Q8NCG5 386 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 OR5D14Q8NGL3 314 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 CORO2AQ92828 525 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 LGALS12Q96DT0 336 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 NR1H4Q96RI1 486 aaPredicted RBP14.27□□□□□ -0.13
PCF11-206ENST00000533018 COMMD4Q9H0A8 199 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 RHOFQ9HBH0 211 aa14.27□□□□□ -0.13
PCF11-206ENST00000533018 EXOGQ9Y2C4 368 aaKnown RBP14.27□□□□□ -0.13
PCF11-206ENST00000533018 HSPB6O14558 160 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 LPLP06858 475 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 PF4V1P10720 104 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 CD33P20138 364 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 GDNFP39905 211 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 OR3A4PP47883 348 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 GALEQ14376 348 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 KISS1Q15726 138 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 ABCA11PQ4W5N1 156 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 SAXO1Q8IYX7 474 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 CBR4Q8N4T8 237 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 OR5AK2Q8NH90 309 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 MRAPQ8TCY5 172 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 WIPF2Q8TF74 440 aaPredicted RBP14.26□□□□□ -0.13
PCF11-206ENST00000533018 TSEN15Q8WW01 171 aaKnown RBP14.26□□□□□ -0.13
PCF11-206ENST00000533018 CREB3L1Q96BA8 519 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 OCSTAMPQ9BR26 566 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 SLC25A33Q9BSK2 321 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 ISG20L2Q9H9L3 353 aaKnown RBP14.26□□□□□ -0.13
PCF11-206ENST00000533018 LIN7BQ9HAP6 207 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 ZNF286AQ9HBT8 521 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 MYRFQ9Y2G1 1151 aa14.26□□□□□ -0.13
PCF11-206ENST00000533018 ADARB2-AS1A8MUL3 147 aa14.25□□□□□ -0.13
PCF11-206ENST00000533018 BUB1B-PAK6H3BSN5 160 aa14.25□□□□□ -0.13
PCF11-206ENST00000533018 SLC33A1O00400 549 aaPredicted RBP14.25□□□□□ -0.13
PCF11-206ENST00000533018 MAGEB3O15480 346 aa14.25□□□□□ -0.13
PCF11-206ENST00000533018 SULT1B1O43704 296 aa14.25□□□□□ -0.13
PCF11-206ENST00000533018 FADS2O95864 444 aaKnown RBP14.25□□□□□ -0.13
PCF11-206ENST00000533018 DBTP11182 482 aaKnown RBP14.25□□□□□ -0.13
PCF11-206ENST00000533018 MNDAP41218 407 aa14.25□□□□□ -0.13
PCF11-206ENST00000533018 C9orf152Q5JTZ5 239 aa14.25□□□□□ -0.13
PCF11-206ENST00000533018 LPCAT4Q643R3 524 aa14.25□□□□□ -0.13
PCF11-206ENST00000533018 Q6P435 159 aa14.25□□□□□ -0.13
PCF11-206ENST00000533018 Q6ZPA2 131 aa14.25□□□□□ -0.13
PCF11-206ENST00000533018 SATL1Q86VE3 508 aa14.25□□□□□ -0.13
PCF11-206ENST00000533018 COQ2Q96H96 371 aa14.25□□□□□ -0.13
PCF11-206ENST00000533018 Q96MT0 163 aa14.25□□□□□ -0.13
PCF11-206ENST00000533018 GPER1Q99527 375 aa14.25□□□□□ -0.13
PCF11-206ENST00000533018 AMBNQ9NP70 447 aa14.25□□□□□ -0.13
PCF11-206ENST00000533018 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.25□□□□□ -0.13
PCF11-206ENST00000533018 DHDHQ9UQ10 334 aa14.25□□□□□ -0.13
PCF11-206ENST00000533018 TCRBV4S1A1TA0A5B7 111 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 SH2D7A6NKC9 451 aaPredicted RBP14.24□□□□□ -0.13
PCF11-206ENST00000533018 H0YJX3 145 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 ZFPL1O95159 310 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 IGLV1-47P01700 117 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 CSN2P05814 226 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 RPSAP08865 295 aaKnown RBP14.24□□□□□ -0.13
PCF11-206ENST00000533018 GLP1RP43220 463 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 HLA-DRB5Q30154 266 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 KHDC1LQ5JSQ8 128 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 TPTE2P1Q5T6R2 138 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 CCDC144NLQ6NUI1 221 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 ZFP1Q6P2D0 407 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 CCDC121Q6ZUS5 278 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 SYS1Q8N2H4 156 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 ZNF565Q8N9K5 539 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 PHF21AQ96BD5 680 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 RBM14Q96PK6 669 aaKnown RBP14.24□□□□□ -0.13
PCF11-206ENST00000533018 PDCD1LG2Q9BQ51 273 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 PPIL3Q9H2H8 161 aaKnown RBP14.24□□□□□ -0.13
PCF11-206ENST00000533018 NECAP2Q9NVZ3 263 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 OR6C3Q9NZP0 311 aa14.24□□□□□ -0.13
PCF11-206ENST00000533018 TMEM212A6NML5 194 aa14.23□□□□□ -0.13
PCF11-206ENST00000533018 ZNF729A6NN14 1252 aaPredicted RBP14.23□□□□□ -0.13
PCF11-206ENST00000533018 H3BNX3 289 aa14.23□□□□□ -0.13
PCF11-206ENST00000533018 MPZL2O60487 215 aa14.23□□□□□ -0.13
PCF11-206ENST00000533018 OR2F2O95006 317 aa14.23□□□□□ -0.13
PCF11-206ENST00000533018 PF4P02776 101 aa14.23□□□□□ -0.13
PCF11-206ENST00000533018 CCDC159P0C7I6 412 aa14.23□□□□□ -0.13
PCF11-206ENST00000533018 MTNR1BP49286 362 aa14.23□□□□□ -0.13
PCF11-206ENST00000533018 GBX2P52951 348 aaPredicted RBP14.23□□□□□ -0.13
PCF11-206ENST00000533018 ZP1P60852 638 aa14.23□□□□□ -0.13
PCF11-206ENST00000533018 CD83Q01151 205 aa14.23□□□□□ -0.13
PCF11-206ENST00000533018 CDK5R1Q15078 307 aa14.23□□□□□ -0.13
PCF11-206ENST00000533018 PAN3Q58A45 887 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms