RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 TCF23Q7RTU1 214 aa16.26■□□□□ 0.19
CPSF1-209ENST00000532725 OSR2Q8N2R0 312 aa16.26■□□□□ 0.19
CPSF1-209ENST00000532725 PIP4P2Q8N4L2 257 aa16.26■□□□□ 0.19
CPSF1-209ENST00000532725 TPRX1Q8N7U7 411 aa16.26■□□□□ 0.19
CPSF1-209ENST00000532725 NKAIN3Q8N8D7 197 aa16.26■□□□□ 0.19
CPSF1-209ENST00000532725 OR4D6Q8NGJ1 314 aa16.26■□□□□ 0.19
CPSF1-209ENST00000532725 C1orf147Q96MC9 270 aaPredicted RBP16.26■□□□□ 0.19
CPSF1-209ENST00000532725 JMJD8Q96S16 334 aa16.26■□□□□ 0.19
CPSF1-209ENST00000532725 S100A13Q99584 98 aa16.26■□□□□ 0.19
CPSF1-209ENST00000532725 TCF7L1Q9HCS4 588 aa16.26■□□□□ 0.19
CPSF1-209ENST00000532725 TRAV24A0A0B4J272 114 aa16.25■□□□□ 0.19
CPSF1-209ENST00000532725 RNF212BA8MTL3 300 aa16.25■□□□□ 0.19
CPSF1-209ENST00000532725 CSTBP04080 98 aaKnown RBP16.25■□□□□ 0.19
CPSF1-209ENST00000532725 FABP5Q01469 135 aa16.25■□□□□ 0.19
CPSF1-209ENST00000532725 EDDM3AQ14507 147 aa16.25■□□□□ 0.19
CPSF1-209ENST00000532725 DEFB112Q30KQ8 113 aa16.25■□□□□ 0.19
CPSF1-209ENST00000532725 SLC22A6Q4U2R8 563 aa16.25■□□□□ 0.19
CPSF1-209ENST00000532725 HSD17B12Q53GQ0 312 aa16.25■□□□□ 0.19
CPSF1-209ENST00000532725 UBE2UQ5VVX9 321 aa16.25■□□□□ 0.19
CPSF1-209ENST00000532725 GLIPR1L1Q6UWM5 242 aa16.25■□□□□ 0.19
CPSF1-209ENST00000532725 RBMS3Q6XE24 437 aaKnown RBP16.25■□□□□ 0.19
CPSF1-209ENST00000532725 SVOPQ8N4V2 548 aa16.25■□□□□ 0.19
CPSF1-209ENST00000532725 UQCC2Q9BRT2 126 aa16.25■□□□□ 0.19
CPSF1-209ENST00000532725 PCDHB16Q9NRJ7 776 aa16.25■□□□□ 0.19
CPSF1-209ENST00000532725 ST3GAL6Q9Y274 331 aa16.25■□□□□ 0.19
CPSF1-209ENST00000532725 MRPS28Q9Y2Q9 187 aaKnown RBP16.25■□□□□ 0.19
CPSF1-209ENST00000532725 A0A1W2PP11 408 aa16.24■□□□□ 0.19
CPSF1-209ENST00000532725 hADV38S2A0JD32 116 aa16.24■□□□□ 0.19
CPSF1-209ENST00000532725 MEX3AA1L020 520 aaKnown RBP16.24■□□□□ 0.19
CPSF1-209ENST00000532725 CSN2P05814 226 aa16.24■□□□□ 0.19
CPSF1-209ENST00000532725 ZNF728P0DKX0 622 aa16.24■□□□□ 0.19
CPSF1-209ENST00000532725 SERPINA2P20848 420 aa16.24■□□□□ 0.19
CPSF1-209ENST00000532725 GABRA5P31644 462 aa16.24■□□□□ 0.19
CPSF1-209ENST00000532725 UBE2E1P51965 193 aa16.24■□□□□ 0.19
CPSF1-209ENST00000532725 GUCA2AQ02747 115 aa16.24■□□□□ 0.19
CPSF1-209ENST00000532725 AESQ08117 197 aa16.24■□□□□ 0.19
CPSF1-209ENST00000532725 KLRD1Q13241 179 aa16.24■□□□□ 0.19
CPSF1-209ENST00000532725 GPR176Q14439 515 aa16.24■□□□□ 0.19
CPSF1-209ENST00000532725 NCR3LG1Q68D85 454 aa16.24■□□□□ 0.19
CPSF1-209ENST00000532725 ZFAND2BQ8WV99 257 aa16.24■□□□□ 0.19
CPSF1-209ENST00000532725 FOXRED1Q96CU9 486 aaPredicted RBP16.24■□□□□ 0.19
CPSF1-209ENST00000532725 PPA2Q9H2U2 334 aa16.24■□□□□ 0.19
CPSF1-209ENST00000532725 IFT22Q9H7X7 185 aa16.24■□□□□ 0.19
CPSF1-209ENST00000532725 ZNF581Q9P0T4 197 aa16.24■□□□□ 0.19
CPSF1-209ENST00000532725 DSCAML1Q8TD84 2053 aa16.23■□□□□ 0.19
CPSF1-209ENST00000532725 MDFIC2A0A1B0GVS7 189 aa16.23■□□□□ 0.19
CPSF1-209ENST00000532725 hCG_1809904A0A1W2PP81 198 aa16.23■□□□□ 0.19
CPSF1-209ENST00000532725 A0A1W2PPE2 198 aa16.23■□□□□ 0.19
CPSF1-209ENST00000532725 A0A1W2PR64 198 aa16.23■□□□□ 0.19
CPSF1-209ENST00000532725 A0A1W2PRV1 198 aa16.23■□□□□ 0.19
CPSF1-209ENST00000532725 GTF2F2P13984 249 aa16.23■□□□□ 0.19
CPSF1-209ENST00000532725 GLIPR1P48060 266 aa16.23■□□□□ 0.19
CPSF1-209ENST00000532725 P2RX3P56373 397 aa16.23■□□□□ 0.19
CPSF1-209ENST00000532725 RBM11P57052 281 aaKnown RBP16.23■□□□□ 0.19
CPSF1-209ENST00000532725 C1orf100Q5SVJ3 147 aa16.23■□□□□ 0.19
CPSF1-209ENST00000532725 GLT8D1Q68CQ7 371 aa16.23■□□□□ 0.19
CPSF1-209ENST00000532725 ZNF773Q6PK81 442 aa16.23■□□□□ 0.19
CPSF1-209ENST00000532725 CORO2AQ92828 525 aa16.23■□□□□ 0.19
CPSF1-209ENST00000532725 COQ2Q96H96 371 aa16.23■□□□□ 0.19
CPSF1-209ENST00000532725 LINC00312Q9Y6C7 94 aa16.23■□□□□ 0.19
CPSF1-209ENST00000532725 GEMIN2O14893 280 aaKnown RBP16.22■□□□□ 0.19
CPSF1-209ENST00000532725 BAMBIQ13145 260 aa16.22■□□□□ 0.19
CPSF1-209ENST00000532725 AWAT2Q6E213 333 aa16.22■□□□□ 0.19
CPSF1-209ENST00000532725 Q6YL49 198 aa16.22■□□□□ 0.19
CPSF1-209ENST00000532725 PNKDQ8N490 385 aa16.22■□□□□ 0.19
CPSF1-209ENST00000532725 MRPS24Q96EL2 167 aaKnown RBP16.22■□□□□ 0.19
CPSF1-209ENST00000532725 ZNF714Q96N38 554 aa16.22■□□□□ 0.19
CPSF1-209ENST00000532725 HEXA-AS1Q9H8Q6 139 aa16.22■□□□□ 0.19
CPSF1-209ENST00000532725 NDUFB11Q9NX14 153 aa16.22■□□□□ 0.19
CPSF1-209ENST00000532725 KIAA2026Q5HYC2 2103 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 A0A0U1RQK1 487 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 A0A1W2PRD5 423 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 A0A1W2PRF3 423 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 A0A1W2PRM7 423 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 FUOMA2VDF0 154 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 TRIM77I1YAP6 450 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 NPFFO15130 113 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 ARL6IP5O75915 188 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 RBP4P02753 201 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 UBA52P62987 128 aaKnown RBP16.21■□□□□ 0.19
CPSF1-209ENST00000532725 SLC9A3R2Q15599 337 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 KCTD21Q4G0X4 260 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 PAN3Q58A45 887 aaKnown RBP16.21■□□□□ 0.19
CPSF1-209ENST00000532725 KRBOX4Q5JUW0 171 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 CD200R1LQ6Q8B3 271 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 LINC00596Q86U02 117 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 TMEM104Q8NE00 496 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 FAM216AQ8WUB2 273 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 ZDHHC16Q969W1 377 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 GFI1Q99684 422 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 C19orf24Q9BVV8 132 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 SLITRK2Q9H156 845 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 NCOR1P1Q9H4R4 102 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 GHRLQ9UBU3 117 aa16.21■□□□□ 0.19
CPSF1-209ENST00000532725 UBE2J1Q9Y385 318 aaPredicted RBP16.21■□□□□ 0.19
CPSF1-209ENST00000532725 ODAMA1E959 279 aa16.2■□□□□ 0.18
CPSF1-209ENST00000532725 DNAJC9-AS1A6NH13 148 aa16.2■□□□□ 0.18
CPSF1-209ENST00000532725 CLDN34H7C241 214 aa16.2■□□□□ 0.18
CPSF1-209ENST00000532725 OR7C1O76099 320 aaPredicted RBP16.2■□□□□ 0.18
CPSF1-209ENST00000532725 PAX5Q02548 391 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms