RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 C16orf82Q7Z2V1 217 aa12.64□□□□□ -0.39
CPSF1-205ENST00000531042 LHFPL3Q86UP9 236 aa12.64□□□□□ -0.39
CPSF1-205ENST00000531042 MRPL48Q96GC5 212 aaKnown RBP12.64□□□□□ -0.39
CPSF1-205ENST00000531042 NEK6Q9HC98 313 aa12.64□□□□□ -0.39
CPSF1-205ENST00000531042 ODAMA1E959 279 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 FAM172BPA6NC97 362 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 LEUTXA8MZ59 168 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 SLC33A1O00400 549 aaPredicted RBP12.63□□□□□ -0.39
CPSF1-205ENST00000531042 ALX3O95076 343 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 CD24P25063 80 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 CD34P28906 385 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 BRS3P32247 399 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 KPNB1Q14974 876 aaKnown RBP12.63□□□□□ -0.39
CPSF1-205ENST00000531042 OXLD1Q5BKU9 147 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 KRBOX4Q5JUW0 171 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 REC114Q7Z4M0 266 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 SYS1Q8N2H4 156 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 CBR4Q8N4T8 237 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 CHST4Q8NCG5 386 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 STMN2Q93045 179 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 COQ2Q96H96 371 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 MYCBPQ99417 103 aaPredicted RBP12.63□□□□□ -0.39
CPSF1-205ENST00000531042 ALG8Q9BVK2 526 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 ISG20L2Q9H9L3 353 aaKnown RBP12.63□□□□□ -0.39
CPSF1-205ENST00000531042 LIN7BQ9HAP6 207 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 ZNF286AQ9HBT8 521 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 MYRFQ9Y2G1 1151 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 GMPPBQ9Y5P6 360 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 DNAH3Q8TD57 4116 aa12.63□□□□□ -0.39
CPSF1-205ENST00000531042 DEGS1O15121 323 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 ZFPL1O95159 310 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 HCKP08631 526 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 RPSAP08865 295 aaKnown RBP12.62□□□□□ -0.39
CPSF1-205ENST00000531042 TMEM225BP0DP42 221 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 DBTP11182 482 aaKnown RBP12.62□□□□□ -0.39
CPSF1-205ENST00000531042 PTGFRP43088 359 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 ZP1P60852 638 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 CD83Q01151 205 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 CDK5R1Q15078 307 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 KISS1Q15726 138 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 ZFP1Q6P2D0 407 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 SERPINA12Q8IW75 414 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 PARP16Q8N5Y8 322 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 OR5AU1Q8NGC0 362 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 OR4D6Q8NGJ1 314 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 OR5D14Q8NGL3 314 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 AKR1E2Q96JD6 320 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 ZNF649Q9BS31 505 aa12.62□□□□□ -0.39
CPSF1-205ENST00000531042 A0A087X0M5 115 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 A0A1B0GX30 115 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 ZNF729A6NN14 1252 aaPredicted RBP12.61□□□□□ -0.39
CPSF1-205ENST00000531042 E9PI62 339 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 BUB1B-PAK6H3BSN5 160 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 TOR1AO14656 332 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 SULT1B1O43704 296 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 FADS2O95864 444 aaKnown RBP12.61□□□□□ -0.39
CPSF1-205ENST00000531042 CEACAM3P40198 252 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 ARHGDIBP52566 201 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 PRRX1P54821 245 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 ATXN7L3Q14CW9 347 aaPredicted RBP12.61□□□□□ -0.39
CPSF1-205ENST00000531042 C17orf58Q2M2W7 97 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 HLA-DRB5Q30154 266 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 Q6ZPA2 131 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 OR5AK2Q8NH90 309 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 RHOXF1Q8NHV9 184 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 CREB3L1Q96BA8 519 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 RBM14Q96PK6 669 aaKnown RBP12.61□□□□□ -0.39
CPSF1-205ENST00000531042 SLC25A33Q9BSK2 321 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 PPIL3Q9H2H8 161 aaKnown RBP12.61□□□□□ -0.39
CPSF1-205ENST00000531042 ERVK13-1Q9NX77 482 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 ING3Q9NXR8 418 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 NOTCH3Q9UM47 2321 aa12.61□□□□□ -0.39
CPSF1-205ENST00000531042 TMEM212A6NML5 194 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 LY6LH3BQJ8 138 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 MPZL2O60487 215 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 OR2F2O95006 317 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 MTNR1BP49286 362 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 RAB40BQ12829 278 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 MRPL28Q13084 256 aaKnown RBP12.6□□□□□ -0.39
CPSF1-205ENST00000531042 ABCA11PQ4W5N1 156 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 UTF1Q5T230 341 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 TPTE2P1Q5T6R2 138 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 ZNF691Q5VV52 312 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 CENPVQ7Z7K6 275 aaPredicted RBP12.6□□□□□ -0.39
CPSF1-205ENST00000531042 OR51T1Q8NGJ9 327 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 CAPSLQ8WWF8 208 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 Q96MT0 163 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 PDCD1LG2Q9BQ51 273 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 AMBNQ9NP70 447 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 INPP5EQ9NRR6 644 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 OR6C3Q9NZP0 311 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 DHDHQ9UQ10 334 aa12.6□□□□□ -0.39
CPSF1-205ENST00000531042 KBTBD11-OT1A0A1B0GTJ5 212 aa12.59□□□□□ -0.39
CPSF1-205ENST00000531042 A0A1W2PRX2 142 aa12.59□□□□□ -0.39
CPSF1-205ENST00000531042 H0YJX3 145 aa12.59□□□□□ -0.39
CPSF1-205ENST00000531042 AMY1AP04745 511 aa12.59□□□□□ -0.39
CPSF1-205ENST00000531042 AMY2AP04746 511 aa12.59□□□□□ -0.39
CPSF1-205ENST00000531042 CCDC159P0C7I6 412 aa12.59□□□□□ -0.39
CPSF1-205ENST00000531042 CGB3P0DN86 165 aa12.59□□□□□ -0.39
CPSF1-205ENST00000531042 CGB7P0DN87 165 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms