RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ABHD3Q8WU67 409 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 SDR42E1Q8WUS8 393 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 SKA2Q8WVK7 121 aaPredicted RBP3.58□□□□□ -1.84
CD44-213ENST00000525209 MARC2Q969Z3 335 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 NABP1Q96AH0 204 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 ZNF486Q96H40 463 aaPredicted RBP3.58□□□□□ -1.84
CD44-213ENST00000525209 PYURFQ96I23 114 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 C18orf12Q96KH6 178 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 BTN2A3PQ96KV6 586 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 FAM19A4Q96LR4 140 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 RDH12Q96NR8 316 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 TBX5Q99593 518 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 EMC6Q9BV81 110 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 SELENOIQ9C0D9 397 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 PRSS22Q9GZN4 317 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 IDI2-AS1Q9NZ38 188 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 OR12D3Q9UGF7 316 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 INSL5Q9Y5Q6 135 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 NFAT5O94916 1531 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 COL24A1Q17RW2 1714 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 DENND4AQ7Z401 1863 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 TRPM7Q96QT4 1865 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 MTCL1Q9Y4B5 1905 aaKnown RBP3.58□□□□□ -1.84
CD44-213ENST00000525209 RALGAPA1Q6GYQ0 2036 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 IGHV3OR16-12A0A075B7B8 117 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 IGKV1D-13A0A0B4J2D9 117 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 SMIM35A0A1B0GVV1 85 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 RBMY1BA6NDE4 496 aaKnown RBP3.57□□□□□ -1.84
CD44-213ENST00000525209 RBMY1EA6NEQ0 496 aaKnown RBP3.57□□□□□ -1.84
CD44-213ENST00000525209 OR4C46A6NHA9 309 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 BTNL10A8MVZ5 291 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 K7EP13 123 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 PDE6DO43924 150 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 MOSP00540 346 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 IL3P08700 152 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 RBMY1DP0C7P1 496 aaKnown RBP3.57□□□□□ -1.84
CD44-213ENST00000525209 RBMY1A1P0DJD3 496 aaKnown RBP3.57□□□□□ -1.84
CD44-213ENST00000525209 IGKV1-13P0DP09 117 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 OGNP20774 298 aaKnown RBP3.57□□□□□ -1.84
CD44-213ENST00000525209 GABRR1P24046 479 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 POLR2AP24928 1970 aaKnown RBP3.57□□□□□ -1.84
CD44-213ENST00000525209 MEOX2P50222 304 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 RAP1BP61224 184 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 PRDX1Q06830 199 aaKnown RBP3.57□□□□□ -1.84
CD44-213ENST00000525209 ZNF266Q14584 549 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 SURF2Q15527 256 aaPredicted RBP3.57□□□□□ -1.84
CD44-213ENST00000525209 ZNF630Q2M218 657 aaPredicted RBP3.57□□□□□ -1.84
CD44-213ENST00000525209 SMIM21Q3B7S5 101 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 ACOT6Q3I5F7 207 aaPredicted RBP3.57□□□□□ -1.84
CD44-213ENST00000525209 TMEM78Q5T7P6 136 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 PDE4DIPQ5VU43 2346 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 TEX36Q5VZQ5 186 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 SPNS3Q6ZMD2 512 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 PEX26Q7Z412 305 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 LRRTM1Q86UE6 522 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 ANGPTL5Q86XS5 388 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 CHST4Q8NCG5 386 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 OR5AP2Q8NGF4 316 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 OR4P4Q8NGL7 312 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 MCFD2Q8NI22 146 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 GRPEL2Q8TAA5 225 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 ZFP90Q8TF47 636 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 CYGBQ8WWM9 190 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 SRSF12Q8WXF0 261 aaKnown RBP3.57□□□□□ -1.84
CD44-213ENST00000525209 CHCHD10Q8WYQ3 142 aaPredicted RBP3.57□□□□□ -1.84
CD44-213ENST00000525209 ST6GAL2Q96JF0 529 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 KIF20BQ96Q89 1820 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 ZNF300Q96RE9 604 aaPredicted RBP3.57□□□□□ -1.84
CD44-213ENST00000525209 RNF126Q9BV68 326 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 RIOK2Q9BVS4 552 aaKnown RBP3.57□□□□□ -1.84
CD44-213ENST00000525209 MS4A8Q9BY19 250 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 C20orf85Q9H1P6 137 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 ABCG5Q9H222 651 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 DDX31Q9H8H2 851 aaKnown RBP3.57□□□□□ -1.84
CD44-213ENST00000525209 EBF2Q9HAK2 575 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 TPT1P8Q9HAU6 139 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 LRTM1Q9HBL6 345 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 KIF13BQ9NQT8 1826 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 RGS18Q9NS28 235 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 OCIAD1Q9NX40 245 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 VSIG4Q9Y279 399 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 UTP11Q9Y3A2 253 aaKnown RBP3.57□□□□□ -1.84
CD44-213ENST00000525209 TOGARAM1Q9Y4F4 1720 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 V9GY05 133 aa3.57□□□□□ -1.84
CD44-213ENST00000525209 PHF3Q92576 2039 aaKnown RBP3.56□□□□□ -1.84
CD44-213ENST00000525209 RLFQ13129 1914 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 SCN4AP35499 1836 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 VIRMAQ69YN4 1812 aaKnown RBP3.56□□□□□ -1.84
CD44-213ENST00000525209 EDC4Q6P2E9 1401 aaKnown RBP3.56□□□□□ -1.84
CD44-213ENST00000525209 C10orf71Q711Q0 1435 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 RTL9Q8NET4 1388 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 IGLV1-36A0A0B4J1U3 117 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 A0A0B4J2A0 478 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 A0A0G2JRQ6 117 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 IGLV5-39A0A0G2JS06 123 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 PQLC2LA1A4F0 135 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 TMEM150BA6NC51 233 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 LINC01548A6NM66 108 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 G3V2L1 256 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 K7EQD1 137 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms