RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 OPN1LWP04000 364 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 HPNP05981 417 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 RAC2P15153 192 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 GALR1P47211 349 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 SLC37A1P57057 533 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 RPL18Q07020 188 aaKnown RBP7.29□□□□□ -1.24
CSMD1-213ENST00000523488 ATP6V1FQ16864 119 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 C9orf50Q5SZB4 431 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 ABHD12BQ7Z5M8 362 aaPredicted RBP7.29□□□□□ -1.24
CSMD1-213ENST00000523488 TMEM25Q86YD3 366 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 LGI3Q8N145 548 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 TMEM217Q8N7C4 229 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 OR5T1Q8NG75 326 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 OR51T1Q8NGJ9 327 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 OR5D14Q8NGL3 314 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 CIB3Q96Q77 187 aaPredicted RBP7.29□□□□□ -1.24
CSMD1-213ENST00000523488 OR2A5Q96R48 311 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 ZNF2Q9BSG1 426 aaPredicted RBP7.29□□□□□ -1.24
CSMD1-213ENST00000523488 VN1R1Q9GZP7 353 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 CDS2O95674 445 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 POU2F2P09086 479 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 DUSP1P28562 367 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 MRPS34P82930 218 aaKnown RBP7.29□□□□□ -1.24
CSMD1-213ENST00000523488 MPV17LQ2QL34 196 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 AGBL4Q5VU57 503 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 ZNF524Q96C55 264 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 GNPNAT1Q96EK6 184 aaPredicted RBP7.29□□□□□ -1.24
CSMD1-213ENST00000523488 ARHGAP5-AS1Q96IT6 56 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 SMIM7Q9BQ49 75 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 ABHD6Q9BV23 337 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 LYRM2Q9NU23 88 aaPredicted RBP7.29□□□□□ -1.24
CSMD1-213ENST00000523488 HCFC1R1Q9NWW0 138 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 LOC105371242A0A075B767 164 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 CCDC163A0A0D9SF12 145 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 SCDO00767 359 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 LATO43561 262 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 GZMHP20718 246 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 IGFBP4P22692 258 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 KLF3P57682 345 aaPredicted RBP7.28□□□□□ -1.24
CSMD1-213ENST00000523488 FXYD4P59646 89 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 VHLLQ6RSH7 139 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 LCN15Q6UWW0 184 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 TMEFF1Q8IYR6 380 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 SUMF1Q8NBK3 374 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 OR52R1Q8NGF1 315 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 TP53TG3Q9ULZ0 132 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 RFNGQ9Y644 331 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 DOCK9Q9BZ29 2069 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 NPIPA2E9PIF3 369 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 SLC33A1O00400 549 aaPredicted RBP7.28□□□□□ -1.24
CSMD1-213ENST00000523488 LMX1BO60663 402 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 NXPH2O95156 264 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 IFNA1P01562 189 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 DCAF7P61962 342 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 EWSR1Q01844 656 aaKnown RBP eCLIP7.28□□□□□ -1.24
CSMD1-213ENST00000523488 PDGFRLQ15198 375 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 CD226Q15762 336 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 CLEC2AQ6UVW9 174 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 MEX3BQ6ZN04 569 aaKnown RBP7.28□□□□□ -1.24
CSMD1-213ENST00000523488 GRINAQ7Z429 371 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 OR10G8Q8NGN5 311 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 SLC35E1Q96K37 410 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 ALKBH7Q9BT30 221 aaPredicted RBP7.28□□□□□ -1.24
CSMD1-213ENST00000523488 RPH3ALQ9UNE2 315 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 MYOFQ9NZM1 2061 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 A0A1W2PQD3 144 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 ZNF850A8MQ14 1090 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 SERPINE3A8MV23 424 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 TMPRSS2O15393 492 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 MT-ATP6P00846 226 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 IFNA5P01569 189 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 CT62P0C5K7 136 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 TCN2P20062 427 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 CNN1P51911 297 aaKnown RBP7.28□□□□□ -1.24
CSMD1-213ENST00000523488 ZNF133P52736 654 aaPredicted RBP7.28□□□□□ -1.24
CSMD1-213ENST00000523488 WBP2NLQ6ICG8 309 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 C16orf82Q7Z2V1 217 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 SPRED2Q7Z698 418 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 OR2C3Q8N628 320 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 OR2V1Q8NHB1 315 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 PTPMT1Q8WUK0 201 aaPredicted RBP7.28□□□□□ -1.24
CSMD1-213ENST00000523488 TMEM171Q8WVE6 324 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 FGF14Q92915 247 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 SIGLEC12Q96PQ1 595 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 SEPSECSQ9HD40 501 aaKnown RBP7.28□□□□□ -1.24
CSMD1-213ENST00000523488 Q9N2K0 584 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 TMEM74BQ9NUR3 256 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 SLC45A2Q9UMX9 530 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 PCNX3Q9H6A9 2034 aa7.28□□□□□ -1.24
CSMD1-213ENST00000523488 F6UZH7 168 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 VENTXO95231 258 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 SLC35E2P0CK97 266 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 DTYMKP23919 212 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 BLVRBP30043 206 aaPredicted RBP7.27□□□□□ -1.25
CSMD1-213ENST00000523488 PIGPP57054 158 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 FUT7Q11130 342 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 RTN4RL2Q86UN3 420 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 Q8NFD4 153 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 OR4N2Q8NGD1 307 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF552Q9H707 407 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms