RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 C16orf87Q6PH81 154 aa16.84■□□□□ 0.29
TRIM35-203ENST00000521253 CHST4Q8NCG5 386 aa16.84■□□□□ 0.29
TRIM35-203ENST00000521253 Q8NFD4 153 aa16.84■□□□□ 0.29
TRIM35-203ENST00000521253 TAF15Q92804 592 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRIM35-203ENST00000521253 ZNF714Q96N38 554 aa16.84■□□□□ 0.29
TRIM35-203ENST00000521253 CHIAQ9BZP6 476 aa16.84■□□□□ 0.29
TRIM35-203ENST00000521253 RAB26Q9ULW5 256 aa16.84■□□□□ 0.29
TRIM35-203ENST00000521253 ING4Q9UNL4 249 aa16.84■□□□□ 0.29
TRIM35-203ENST00000521253 FOXJ3Q9UPW0 622 aa16.84■□□□□ 0.29
TRIM35-203ENST00000521253 POMT1Q9Y6A1 747 aa16.84■□□□□ 0.29
TRIM35-203ENST00000521253 LINC00312Q9Y6C7 94 aa16.84■□□□□ 0.29
TRIM35-203ENST00000521253 HTR3BO95264 441 aa16.83■□□□□ 0.28
TRIM35-203ENST00000521253 COX7A1P24310 79 aa16.83■□□□□ 0.28
TRIM35-203ENST00000521253 MIDNQ504T8 468 aa16.83■□□□□ 0.28
TRIM35-203ENST00000521253 OR51T1Q8NGJ9 327 aa16.83■□□□□ 0.28
TRIM35-203ENST00000521253 C17orf50Q8WW18 174 aa16.83■□□□□ 0.28
TRIM35-203ENST00000521253 METTL9Q9H1A3 318 aa16.83■□□□□ 0.28
TRIM35-203ENST00000521253 ZNRD1Q9P1U0 126 aa16.83■□□□□ 0.28
TRIM35-203ENST00000521253 PAHP00439 452 aa16.82■□□□□ 0.28
TRIM35-203ENST00000521253 RBP4P02753 201 aa16.82■□□□□ 0.28
TRIM35-203ENST00000521253 AESQ08117 197 aa16.82■□□□□ 0.28
TRIM35-203ENST00000521253 IL13RA2Q14627 380 aa16.82■□□□□ 0.28
TRIM35-203ENST00000521253 INSL4Q14641 139 aa16.82■□□□□ 0.28
TRIM35-203ENST00000521253 PIGYQ3MUY2 71 aa16.82■□□□□ 0.28
TRIM35-203ENST00000521253 THRSPQ92748 146 aa16.82■□□□□ 0.28
TRIM35-203ENST00000521253 AJUBAQ96IF1 538 aa16.82■□□□□ 0.28
TRIM35-203ENST00000521253 TMED9Q9BVK6 235 aa16.82■□□□□ 0.28
TRIM35-203ENST00000521253 CCDC90BQ9GZT6 254 aa16.82■□□□□ 0.28
TRIM35-203ENST00000521253 IL36GQ9NZH8 169 aa16.82■□□□□ 0.28
TRIM35-203ENST00000521253 FAM181BA6NEQ2 426 aa16.81■□□□□ 0.28
TRIM35-203ENST00000521253 MAS1P04201 325 aa16.81■□□□□ 0.28
TRIM35-203ENST00000521253 CSN2P05814 226 aa16.81■□□□□ 0.28
TRIM35-203ENST00000521253 IGHV1-8P0DP01 117 aa16.81■□□□□ 0.28
TRIM35-203ENST00000521253 MAPK3P27361 379 aaPredicted RBP16.81■□□□□ 0.28
TRIM35-203ENST00000521253 GLIPR1P48060 266 aa16.81■□□□□ 0.28
TRIM35-203ENST00000521253 ATXN7L3Q14CW9 347 aaPredicted RBP16.81■□□□□ 0.28
TRIM35-203ENST00000521253 AWAT1Q58HT5 328 aa16.81■□□□□ 0.28
TRIM35-203ENST00000521253 PRSS48Q7RTY5 328 aa16.81■□□□□ 0.28
TRIM35-203ENST00000521253 JAGN1Q8N5M9 183 aa16.81■□□□□ 0.28
TRIM35-203ENST00000521253 MS4A15Q8N5U1 240 aa16.81■□□□□ 0.28
TRIM35-203ENST00000521253 COQ2Q96H96 371 aa16.81■□□□□ 0.28
TRIM35-203ENST00000521253 S100A13Q99584 98 aa16.81■□□□□ 0.28
TRIM35-203ENST00000521253 TRAV24A0A0B4J272 114 aa16.8■□□□□ 0.28
TRIM35-203ENST00000521253 FUOMA2VDF0 154 aa16.8■□□□□ 0.28
TRIM35-203ENST00000521253 HSPB6O14558 160 aa16.8■□□□□ 0.28
TRIM35-203ENST00000521253 FOXL1Q12952 345 aa16.8■□□□□ 0.28
TRIM35-203ENST00000521253 ACSM3Q53FZ2 586 aa16.8■□□□□ 0.28
TRIM35-203ENST00000521253 RBM48Q5RL73 367 aaKnown RBP16.8■□□□□ 0.28
TRIM35-203ENST00000521253 LIPKQ5VXJ0 399 aa16.8■□□□□ 0.28
TRIM35-203ENST00000521253 UNQ9370/PRO34162Q6UXP9 181 aa16.8■□□□□ 0.28
TRIM35-203ENST00000521253 TRAPPC6BQ86SZ2 158 aa16.8■□□□□ 0.28
TRIM35-203ENST00000521253 OSR2Q8N2R0 312 aa16.8■□□□□ 0.28
TRIM35-203ENST00000521253 UFD1Q92890 307 aa16.8■□□□□ 0.28
TRIM35-203ENST00000521253 MUL1Q969V5 352 aa16.8■□□□□ 0.28
TRIM35-203ENST00000521253 DPAGT1Q9H3H5 408 aa16.8■□□□□ 0.28
TRIM35-203ENST00000521253 ING3Q9NXR8 418 aa16.8■□□□□ 0.28
TRIM35-203ENST00000521253 UBE2J1Q9Y385 318 aaPredicted RBP16.8■□□□□ 0.28
TRIM35-203ENST00000521253 TRGV10A0A0A0MS01 117 aa16.79■□□□□ 0.28
TRIM35-203ENST00000521253 ODAMA1E959 279 aa16.79■□□□□ 0.28
TRIM35-203ENST00000521253 ZNF780AO75290 641 aaPredicted RBP16.79■□□□□ 0.28
TRIM35-203ENST00000521253 CSTBP04080 98 aaKnown RBP16.79■□□□□ 0.28
TRIM35-203ENST00000521253 HSMCR30P0CW71 290 aa16.79■□□□□ 0.28
TRIM35-203ENST00000521253 SERPINA2P20848 420 aa16.79■□□□□ 0.28
TRIM35-203ENST00000521253 MAP2K4P45985 399 aa16.79■□□□□ 0.28
TRIM35-203ENST00000521253 GP2P55259 537 aaKnown RBP16.79■□□□□ 0.28
TRIM35-203ENST00000521253 RBM11P57052 281 aaKnown RBP16.79■□□□□ 0.28
TRIM35-203ENST00000521253 GPR50Q13585 617 aa16.79■□□□□ 0.28
TRIM35-203ENST00000521253 TAF9Q16594 264 aa16.79■□□□□ 0.28
TRIM35-203ENST00000521253 SLC22A6Q4U2R8 563 aa16.79■□□□□ 0.28
TRIM35-203ENST00000521253 PAN3Q58A45 887 aaKnown RBP16.79■□□□□ 0.28
TRIM35-203ENST00000521253 NHLRC3Q5JS37 347 aa16.79■□□□□ 0.28
TRIM35-203ENST00000521253 KRBOX4Q5JUW0 171 aa16.79■□□□□ 0.28
TRIM35-203ENST00000521253 FAM27D1Q5T7N8 215 aa16.79■□□□□ 0.28
TRIM35-203ENST00000521253 LYPD6Q86Y78 171 aa16.79■□□□□ 0.28
TRIM35-203ENST00000521253 BEND2Q8NDZ0 799 aa16.79■□□□□ 0.28
TRIM35-203ENST00000521253 OR13D1Q8NGV5 346 aa16.79■□□□□ 0.28
TRIM35-203ENST00000521253 ZNF581Q9P0T4 197 aa16.79■□□□□ 0.28
TRIM35-203ENST00000521253 ST3GAL6Q9Y274 331 aa16.79■□□□□ 0.28
TRIM35-203ENST00000521253 DSCAML1Q8TD84 2053 aa16.78■□□□□ 0.28
TRIM35-203ENST00000521253 A0A1W2PP11 408 aa16.78■□□□□ 0.28
TRIM35-203ENST00000521253 MMP23AO75900 390 aa16.78■□□□□ 0.28
TRIM35-203ENST00000521253 CLPXO76031 633 aa16.78■□□□□ 0.28
TRIM35-203ENST00000521253 CFPP27918 469 aa16.78■□□□□ 0.28
TRIM35-203ENST00000521253 LGALS4P56470 323 aa16.78■□□□□ 0.28
TRIM35-203ENST00000521253 GLIPR1L1Q6UWM5 242 aa16.78■□□□□ 0.28
TRIM35-203ENST00000521253 CDH26Q8IXH8 852 aa16.78■□□□□ 0.28
TRIM35-203ENST00000521253 C3orf56Q8N813 242 aa16.78■□□□□ 0.28
TRIM35-203ENST00000521253 NKAIN3Q8N8D7 197 aa16.78■□□□□ 0.28
TRIM35-203ENST00000521253 DYRK2Q92630 601 aa16.78■□□□□ 0.28
TRIM35-203ENST00000521253 CORO2AQ92828 525 aa16.78■□□□□ 0.28
TRIM35-203ENST00000521253 PPIL3Q9H2H8 161 aaKnown RBP16.78■□□□□ 0.28
TRIM35-203ENST00000521253 BLOC1S6Q9UL45 172 aa16.78■□□□□ 0.28
TRIM35-203ENST00000521253 MRPS28Q9Y2Q9 187 aaKnown RBP16.78■□□□□ 0.28
TRIM35-203ENST00000521253 SESN1Q9Y6P5 492 aa16.78■□□□□ 0.28
TRIM35-203ENST00000521253 ODF3BA8MYP8 253 aa16.77■□□□□ 0.28
TRIM35-203ENST00000521253 GEMIN2O14893 280 aaKnown RBP16.77■□□□□ 0.28
TRIM35-203ENST00000521253 GPR137BO60478 399 aa16.77■□□□□ 0.28
TRIM35-203ENST00000521253 SC5DO75845 299 aa16.77■□□□□ 0.28
TRIM35-203ENST00000521253 OR7C1O76099 320 aaPredicted RBP16.77■□□□□ 0.28
TRIM35-203ENST00000521253 ARG1P05089 322 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms