RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 NEK7Q8TDX7 302 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 IL22RA2Q969J5 263 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 MALSU1Q96EH3 234 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 GINS3Q9BRX5 216 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 PCGF1Q9BSM1 259 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 ZNF442Q9H7R0 627 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 NAA60Q9H7X0 242 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 ANXA10Q9UJ72 324 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 IGHV3-64DA0A0J9YX35 117 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 SPTY2D1-AS1A0A0U1RR47 76 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 TRAPPC6AO75865 159 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 OR7C1O76099 320 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-208ENST00000504387 FGF7P21781 194 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 GUCA1AP43080 201 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-208ENST00000504387 GLIPR1P48060 266 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 FAM3BP58499 235 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-208ENST00000504387 HERV-K104P61576 105 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 H3F3AP84243 136 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 HIKESHIQ53FT3 197 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 OR51H1Q8NH63 302 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 HOXB13Q92826 284 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-208ENST00000504387 PTX4Q96A99 478 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 SERINC1Q9NRX5 453 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 R4GN57 208 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 TRAV39A0A0B4J263 110 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 PRR19A6NJB7 356 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 MSTNO14793 375 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 CHST1O43916 411 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 BTF3P20290 206 aaKnown RBP6.63□□□□□ -1.35
NEDD9-208ENST00000504387 AADACP22760 399 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 MPZP25189 248 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 PMELP40967 661 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 NUTF2P61970 127 aaKnown RBP6.63□□□□□ -1.35
NEDD9-208ENST00000504387 GNB2P62879 340 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 HSD11B2P80365 405 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 TMEM187Q14656 261 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 TEX38Q6PEX7 206 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 FBXO46Q6PJ61 603 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-208ENST00000504387 RTL10Q7L3V2 364 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 FBXL14Q8N1E6 418 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 LYPD6BQ8NI32 183 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 LIPHQ8WWY8 451 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 YPEL4Q96NS1 127 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 PLK3Q9H4B4 646 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 METTL7AQ9H8H3 244 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 DCHS1Q96JQ0 3298 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 NCOR1O75376 2440 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 PROB1E7EW31 1015 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 TNFRSF10CO14798 259 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 TMEM50AO95807 157 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 IGHV4-34P06331 123 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 CHRNA7P36544 502 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 SLC10A1Q14973 349 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 HLA-BQ31612 363 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 DMRTA1Q5VZB9 504 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 GRINAQ7Z429 371 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 TMEM252Q8N6L7 170 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 KCNK17Q96T54 332 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 DCAF16Q9NXF7 216 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 PLEK2Q9NYT0 353 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 GTF3C1Q12789 2109 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 ZDBF2Q9HCK1 2354 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 ZNF816-ZNF321PA0A0X1KG74 233 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 CLDN34H7C241 214 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 HSPA12AO43301 675 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 MT-ATP6P00846 226 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 CCNOP22674 350 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 SLC6A8P48029 635 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 UCP3P55916 312 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 HSD17B7P56937 341 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 YPEL5P62699 121 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 PAX5Q02548 391 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 TDRG1Q3Y452 100 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 C1QL4Q86Z23 238 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 IL22RA1Q8N6P7 574 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 GATAD1Q8WUU5 269 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 SDSLQ96GA7 329 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 BOD1Q96IK1 185 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 LYZL4Q96KX0 146 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 NEU1Q99519 415 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 GABRG3Q99928 467 aa6.62□□□□□ -1.35
NEDD9-208ENST00000504387 STRAPQ9Y3F4 350 aaKnown RBP6.62□□□□□ -1.35
NEDD9-208ENST00000504387 A0A1W2PNV4 684 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 HSPB2A8KAH6 182 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 IL18BPO95998 194 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 METTL15P1P0C7V9 234 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 DAP3P51398 398 aaKnown RBP6.61□□□□□ -1.35
NEDD9-208ENST00000504387 SMAD4Q13485 552 aaKnown RBP6.61□□□□□ -1.35
NEDD9-208ENST00000504387 HSPB2Q16082 182 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 KIAA0895LQ68EN5 471 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 TCEAL6Q6IPX3 200 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 LIAT1Q6ZQX7 453 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 TIPARPQ7Z3E1 657 aaKnown RBP6.61□□□□□ -1.35
NEDD9-208ENST00000504387 ADIPOR1Q96A54 375 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 SLC46A1Q96NT5 459 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 OBP2AQ9NY56 170 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 TUBD1Q9UJT1 453 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 DDAH2O95865 285 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 CTSDP07339 412 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-208ENST00000504387 CFPP27918 469 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms