RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 RCC2Q9P258 522 aaKnown RBP11.55□□□□□ -0.56
CYSTM1-202ENST00000504227 RABL2AQ9UBK7 228 aaPredicted RBP11.55□□□□□ -0.56
CYSTM1-202ENST00000504227 METRNQ9UJH8 293 aa11.55□□□□□ -0.56
CYSTM1-202ENST00000504227 RABL2BQ9UNT1 228 aa11.55□□□□□ -0.56
CYSTM1-202ENST00000504227 MRPS7Q9Y2R9 242 aaKnown RBP11.55□□□□□ -0.56
CYSTM1-202ENST00000504227 ASH1LQ9NR48 2969 aaKnown RBP11.55□□□□□ -0.56
CYSTM1-202ENST00000504227 IGHV4-30-2A0A087WSY4 118 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 TMEM82A0PJX8 343 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 UBE2QL1A1L167 161 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 FABP12A6NFH5 140 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 CEACAM18A8MTB9 384 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 VWC2LB2RUY7 222 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 K7N7A8 449 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 HSPB6O14558 160 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 NDUFB3O43676 98 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 GSTP1P09211 210 aaKnown RBP11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 WNT2P09544 360 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 RPS2P15880 293 aaKnown RBP11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 SLC25A16P16260 332 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 HIST1H1DP16402 221 aaKnown RBP11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 MNDAP41218 407 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 TAS2R20P59543 309 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 LRRC10Q5BKY1 277 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 PLAC9Q5JTB6 97 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 SPANXN2Q5MJ10 180 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 BRICD5Q6PL45 260 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 C6orf201Q7Z4U5 140 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 IZUMO1Q8IYV9 350 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 BPIFB2Q8N4F0 458 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 FAM216BQ8N7L0 139 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 ZNRF1Q8ND25 227 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 TMEM185AQ8NFB2 350 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 OR8B3Q8NGG8 313 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 NEIL1Q96FI4 390 aaPredicted RBP11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 OR8B2Q96RD0 313 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 FOXC2Q99958 501 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 FAAP24Q9BTP7 215 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 FAM234AQ9H0X4 552 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 PPA2Q9H2U2 334 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 NARFLQ9H6Q4 476 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 PATZ1Q9HBE1 687 aaKnown RBP11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 MAB21L2Q9Y586 359 aa11.54□□□□□ -0.56
CYSTM1-202ENST00000504227 SERPINE3A8MV23 424 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 MGST3O14880 152 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 PSPNO60542 156 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 ZNF737O75373 536 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 TK1P04183 234 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 GNB3P16520 340 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 KCNJ3P48549 501 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 MRPS15P82914 257 aaKnown RBP11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 GRK1Q15835 563 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 FAM131AQ6UXB0 335 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 C17orf107Q6ZR85 190 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 CCDC190Q86UF4 302 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 OR8H2Q8N162 312 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 OR4S1Q8NGB4 309 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 SULT4A1Q9BR01 284 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 CHST6Q9GZX3 395 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 AUNIPQ9H7T9 357 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 ZMAT3Q9HA38 289 aaKnown RBP11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 ETAA1Q9NY74 926 aa11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 SLC25A10Q9UBX3 287 aaPredicted RBP11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 MAP1AP78559 2803 aaPredicted RBP11.53□□□□□ -0.56
CYSTM1-202ENST00000504227 PRRC2AP48634 2157 aaKnown RBP11.52□□□□□ -0.56
CYSTM1-202ENST00000504227 MALRD1Q5VYJ5 2156 aa11.52□□□□□ -0.56
CYSTM1-202ENST00000504227 MED13LQ71F56 2210 aa11.52□□□□□ -0.56
CYSTM1-202ENST00000504227 NBPF19A0A087WUL8 3843 aa11.52□□□□□ -0.56
CYSTM1-202ENST00000504227 A0A1B0GW55 424 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 FUOMA2VDF0 154 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 MFNGO00587 321 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 DVL1O14640 695 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 CA11O75493 328 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 HEXAP06865 529 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 CD3GP09693 182 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 DUX4L2P0CJ85 424 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 DUX4L3P0CJ86 424 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 DUX4L4P0CJ87 422 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 DUX4L5P0CJ88 424 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 DUX4L6P0CJ89 424 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 DUX4L7P0CJ90 424 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 SELLP14151 372 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 NDUFB7P17568 137 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 OR3A1P47881 315 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 PITPNAQ00169 270 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 MADCAM1Q13477 382 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 ARFRP1Q13795 201 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 IL18Q14116 193 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 PNLIPRP3Q17RR3 467 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 ZNF260Q3ZCT1 412 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 HACD4Q5VWC8 232 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 DUX4L9Q6RFH8 374 aaPredicted RBP11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 GDPD3Q7L5L3 318 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 CLDND2Q8NHS1 167 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 ST8SIA4Q92187 359 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 RAB39BQ96DA2 213 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 SHARPINQ9H0F6 387 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 CTSZQ9UBR2 303 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 DUX4Q9UBX2 424 aa11.52□□□□□ -0.57
CYSTM1-202ENST00000504227 KCNK7Q9Y2U2 307 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms