RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 LPCAT4Q643R3 524 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 LIAT1Q6ZQX7 453 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 ZBTB49Q6ZSB9 765 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 Q8N2B8 174 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 SYS1Q8N2H4 156 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 PQLC1Q8N2U9 271 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 OR4P4Q8NGL7 312 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 NDNFQ8TB73 568 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 RGP1Q92546 391 aaPredicted RBP13.07□□□□□ -0.32
SCLT1-204ENST00000503215 COQ2Q96H96 371 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 OR5M11Q96RB7 305 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 C9orf16Q9BUW7 83 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 CLEC7AQ9BXN2 247 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 COMMD4Q9H0A8 199 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 NEK6Q9HC98 313 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 EXOSC4Q9NPD3 245 aaKnown RBP13.07□□□□□ -0.32
SCLT1-204ENST00000503215 ABCB10Q9NRK6 738 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 SNTNA6NMZ2 147 aa13.06□□□□□ -0.32
SCLT1-204ENST00000503215 CASQ2O14958 399 aaPredicted RBP13.06□□□□□ -0.32
SCLT1-204ENST00000503215 WBP4O75554 376 aaKnown RBP13.06□□□□□ -0.32
SCLT1-204ENST00000503215 TMEM225BP0DP42 221 aa13.06□□□□□ -0.32
SCLT1-204ENST00000503215 CD28P10747 220 aa13.06□□□□□ -0.32
SCLT1-204ENST00000503215 CDK2P24941 298 aa13.06□□□□□ -0.32
SCLT1-204ENST00000503215 LMO1P25800 156 aa13.06□□□□□ -0.32
SCLT1-204ENST00000503215 TMEM95Q3KNT9 176 aa13.06□□□□□ -0.32
SCLT1-204ENST00000503215 MINOS1Q5TGZ0 78 aa13.06□□□□□ -0.32
SCLT1-204ENST00000503215 XAF1Q6GPH4 301 aa13.06□□□□□ -0.32
SCLT1-204ENST00000503215 IZUMO2Q6UXV1 221 aa13.06□□□□□ -0.32
SCLT1-204ENST00000503215 OR51A2Q8NGJ7 313 aa13.06□□□□□ -0.32
SCLT1-204ENST00000503215 GLS2Q9UI32 602 aa13.06□□□□□ -0.32
SCLT1-204ENST00000503215 UBE2J1Q9Y385 318 aaPredicted RBP13.06□□□□□ -0.32
SCLT1-204ENST00000503215 MINOS1-NBL1R4GNA1 71 aa13.06□□□□□ -0.32
SCLT1-204ENST00000503215 FAM90A22PA8MWA6 464 aa13.05□□□□□ -0.32
SCLT1-204ENST00000503215 SLC33A1O00400 549 aaPredicted RBP13.05□□□□□ -0.32
SCLT1-204ENST00000503215 FADS2O95864 444 aaKnown RBP13.05□□□□□ -0.32
SCLT1-204ENST00000503215 HCKP08631 526 aa13.05□□□□□ -0.32
SCLT1-204ENST00000503215 LIMS3P0CW19 117 aa13.05□□□□□ -0.32
SCLT1-204ENST00000503215 LIMS4P0CW20 117 aa13.05□□□□□ -0.32
SCLT1-204ENST00000503215 ZNF44P15621 663 aa13.05□□□□□ -0.32
SCLT1-204ENST00000503215 DYNLT3P51808 116 aa13.05□□□□□ -0.32
SCLT1-204ENST00000503215 KISS1Q15726 138 aa13.05□□□□□ -0.32
SCLT1-204ENST00000503215 C11orf88Q6PI97 169 aa13.05□□□□□ -0.32
SCLT1-204ENST00000503215 SAXO1Q8IYX7 474 aa13.05□□□□□ -0.32
SCLT1-204ENST00000503215 ABHD12Q8N2K0 398 aa13.05□□□□□ -0.32
SCLT1-204ENST00000503215 PARP16Q8N5Y8 322 aa13.05□□□□□ -0.32
SCLT1-204ENST00000503215 OR5AK2Q8NH90 309 aa13.05□□□□□ -0.32
SCLT1-204ENST00000503215 WIPF2Q8TF74 440 aaPredicted RBP13.05□□□□□ -0.32
SCLT1-204ENST00000503215 CORO2AQ92828 525 aa13.05□□□□□ -0.32
SCLT1-204ENST00000503215 PPIL3Q9H2H8 161 aaKnown RBP13.05□□□□□ -0.32
SCLT1-204ENST00000503215 MRPS18AQ9NVS2 196 aaKnown RBP13.05□□□□□ -0.32
SCLT1-204ENST00000503215 ZNF581Q9P0T4 197 aa13.05□□□□□ -0.32
SCLT1-204ENST00000503215 SIRT4Q9Y6E7 314 aaPredicted RBP13.05□□□□□ -0.32
SCLT1-204ENST00000503215 ODAMA1E959 279 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 TMEM212A6NML5 194 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 G3V4G9 280 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 F2RL2O00254 374 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 HSPB6O14558 160 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 DEGS1O15121 323 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 DENRO43583 198 aaKnown RBP13.04□□□□□ -0.32
SCLT1-204ENST00000503215 SULT1B1O43704 296 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 BAG2O95816 211 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 RPL5P46777 297 aaKnown RBP13.04□□□□□ -0.32
SCLT1-204ENST00000503215 SOX2P48431 317 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 HSPA13P48723 471 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 RAB40BQ12829 278 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 ATXN7L3Q14CW9 347 aaPredicted RBP13.04□□□□□ -0.32
SCLT1-204ENST00000503215 NSUN5P1Q3KNT7 163 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 ZNF691Q5VV52 312 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 HEPN1Q6WQI6 88 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 SERPINA12Q8IW75 414 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 Q96MT0 163 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 ZNF286AQ9HBT8 521 aa13.04□□□□□ -0.32
SCLT1-204ENST00000503215 TRGV10A0A0A0MS01 117 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 ADARB2-AS1A8MUL3 147 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 MPZL2O60487 215 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 ALX3O95076 343 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 CLIC3O95833 236 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 HTR1DP28221 377 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 ETV1P50549 477 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 GBX2P52951 348 aaPredicted RBP13.03□□□□□ -0.32
SCLT1-204ENST00000503215 C17orf58Q2M2W7 97 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 KRBOX4Q5JUW0 171 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 OR2G6Q5TZ20 316 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 ZNF529Q6P280 563 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 OR5D14Q8NGL3 314 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 OR10K1Q8NGX5 313 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 TSEN15Q8WW01 171 aaKnown RBP13.03□□□□□ -0.32
SCLT1-204ENST00000503215 MRPL48Q96GC5 212 aaKnown RBP13.03□□□□□ -0.32
SCLT1-204ENST00000503215 CITED2Q99967 270 aaPredicted RBP13.03□□□□□ -0.32
SCLT1-204ENST00000503215 PRSS22Q9GZN4 317 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 WNT10AQ9GZT5 417 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 INPP5EQ9NRR6 644 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 TAS2R4Q9NYW5 299 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 DPM3Q9P2X0 92 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 DHDHQ9UQ10 334 aa13.03□□□□□ -0.32
SCLT1-204ENST00000503215 RPL36Q9Y3U8 105 aaKnown RBP13.03□□□□□ -0.32
SCLT1-204ENST00000503215 TRAV24A0A0B4J272 114 aa13.02□□□□□ -0.33
SCLT1-204ENST00000503215 GABRPO00591 440 aa13.02□□□□□ -0.33
SCLT1-204ENST00000503215 PLXNB1O43157 2135 aa13.02□□□□□ -0.33
SCLT1-204ENST00000503215 FBXO24O75426 580 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms