RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 MPSTP25325 297 aa5.21□□□□□ -1.57
USF3-204ENST00000496826 RHOGP84095 191 aa5.21□□□□□ -1.57
USF3-204ENST00000496826 TSPO2Q5TGU0 170 aa5.21□□□□□ -1.57
USF3-204ENST00000496826 GAPTQ8N292 157 aa5.21□□□□□ -1.57
USF3-204ENST00000496826 SVIPQ8NHG7 77 aa5.21□□□□□ -1.57
USF3-204ENST00000496826 KIR2DL5BQ8NHK3 375 aa5.21□□□□□ -1.57
USF3-204ENST00000496826 LINC00052Q96N35 136 aa5.21□□□□□ -1.57
USF3-204ENST00000496826 MESP1Q9BRJ9 268 aa5.21□□□□□ -1.57
USF3-204ENST00000496826 TMEM94Q12767 1356 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 A2ML1A8K2U0 1454 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 A0A0G2JLW4 131 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 KBTBD11O94819 623 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 FCGR2CP31995 323 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 FAM159AQ6UWV7 190 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 Q6ZS52 159 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 MZB1Q8WU39 189 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 PP6455Q8WZ26 134 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 RHNO1Q9BSD3 238 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 SNHG12Q9BXW3 62 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 NOX4Q9NPH5 578 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 YBX2Q9Y2T7 364 aaKnown RBP5.21□□□□□ -1.58
USF3-204ENST00000496826 SF3B6Q9Y3B4 125 aaKnown RBP5.21□□□□□ -1.58
USF3-204ENST00000496826 CLDN16Q9Y5I7 305 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 WDR81Q562E7 1941 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 IGHV1-69-2A0A0G2JMI3 117 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 JMJD7-PLA2G4BH0Y9G9 81 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 HSPB1P04792 205 aaKnown RBP5.21□□□□□ -1.58
USF3-204ENST00000496826 GZMBP10144 247 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 LOXL3P58215 753 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 NTHL1P78549 312 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 HYAL2Q12891 473 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 NRN1LQ496H8 165 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 OR51H1Q8NH63 302 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 BAHD1Q8TBE0 780 aaPredicted RBP5.21□□□□□ -1.58
USF3-204ENST00000496826 ZNF524Q96C55 264 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 NTMT1Q9BV86 223 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 UBL5Q9BZL1 73 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 THAP10Q9P2Z0 257 aaPredicted RBP5.21□□□□□ -1.58
USF3-204ENST00000496826 TCRBV7S2A1N4TA0A589 114 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 CD74P04233 296 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 SELENOPP49908 381 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 LYZP61626 148 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 CEND1Q8N111 149 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 SNX22Q96L94 193 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 C2orf50Q96LR7 162 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 GPR132Q9UNW8 380 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 PTPN23Q9H3S7 1636 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 A0A087X0M5 115 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 A0A1B0GX30 115 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 SYNGR1O43759 233 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 REG1AP05451 166 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 TMEM215Q68D42 235 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.21□□□□□ -1.58
USF3-204ENST00000496826 BAALCQ8WXS3 180 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 OPALINQ96PE5 141 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 SARGQ9BW04 601 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 LYRM4Q9HD34 91 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 TMED7-TICAM2A0A0A6YYA0 188 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 TRAV17A0A0B4J275 112 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 ZNF888P0CJ79 500 aaPredicted RBP5.21□□□□□ -1.58
USF3-204ENST00000496826 RBM11P57052 281 aaKnown RBP5.21□□□□□ -1.58
USF3-204ENST00000496826 RUNX3Q13761 415 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 MORN1Q5T089 497 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 WFDC8Q8IUA0 241 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 OR1B1Q8NGR6 318 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 DUX5Q96PT3 197 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 SLC6A13Q9NSD5 602 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 OPN4Q9UHM6 478 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 HRH3Q9Y5N1 445 aa5.21□□□□□ -1.58
USF3-204ENST00000496826 MAGI1Q96QZ7 1491 aaPredicted RBP5.2□□□□□ -1.58
USF3-204ENST00000496826 VIRMAQ69YN4 1812 aaKnown RBP5.2□□□□□ -1.58
USF3-204ENST00000496826 TRGV8A0A0C4DH27 118 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 C7orf71A4D174 169 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 EFSO43281 561 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 PPP1R3DO95685 299 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 C1SP09871 688 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 NXPH1P58417 271 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 RBM3P98179 157 aaKnown RBP5.2□□□□□ -1.58
USF3-204ENST00000496826 SPRED3Q2MJR0 410 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 CEACAM21Q3KPI0 293 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 GLRX5Q86SX6 157 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 RTN4RL2Q86UN3 420 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 C1orf162Q8NEQ5 155 aaPredicted RBP5.2□□□□□ -1.58
USF3-204ENST00000496826 ZNF384Q8TF68 577 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 IGSF21Q96ID5 467 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 PAAF1Q9BRP4 392 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 PRADC1Q9BSG0 188 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 SPCS1Q9Y6A9 102 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 SIRT4Q9Y6E7 314 aaPredicted RBP5.2□□□□□ -1.58
USF3-204ENST00000496826 TNS3Q68CZ2 1445 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 IQSEC2Q5JU85 1478 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 MAGI2Q86UL8 1455 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 PCNX2A6NKB5 2137 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 CFHR2P36980 270 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 FMODQ06828 376 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 C10orf113Q5VZT2 155 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 TMEM42Q69YG0 159 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 OR10S1Q8NGN2 331 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 NPIPB3Q92617 1050 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 MRGPRX3Q96LB0 322 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms