RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 CPNE4Q96A23 557 aaPredicted RBP2.44□□□□□ -2.02
SMC4-224ENST00000494612 CIDECQ96AQ7 238 aaPredicted RBP2.44□□□□□ -2.02
SMC4-224ENST00000494612 MBOAT7Q96N66 472 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 OR4K3Q96R72 315 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 GPR21Q99679 349 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 SULT4A1Q9BR01 284 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 MARVELD1Q9BSK0 173 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 NUDT9Q9BW91 350 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 HINT2Q9BX68 163 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 PRRG3Q9BZD7 231 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 ULBP2Q9BZM5 246 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 SIGLEC9Q9Y336 463 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 RBMX2Q9Y388 322 aaKnown RBP2.44□□□□□ -2.02
SMC4-224ENST00000494612 CBY1Q9Y3M2 126 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 COL4A2P08572 1712 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 BAZ2BQ9UIF8 2168 aaKnown RBP2.44□□□□□ -2.02
SMC4-224ENST00000494612 SPTBN2O15020 2390 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 DOCK6Q96HP0 2047 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 FREM2Q5SZK8 3169 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 GCN1Q92616 2671 aaKnown RBP2.43□□□□□ -2.02
SMC4-224ENST00000494612 IGKV1D-17A0A075B6S4 117 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 CENPVL3A0A0U1RRI6 287 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 MYBPHLA2RUH7 354 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 HSBP1L1C9JCN9 74 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 J3QKU1 62 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 M0R1X1 148 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 RAD1O60671 282 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 CYB5R3P00387 301 aaPredicted RBP2.43□□□□□ -2.02
SMC4-224ENST00000494612 MT-ND4P03905 459 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 CD74P04233 296 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 RPN2P04844 631 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 CD5P06127 495 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 HTR1DP28221 377 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 DEKP35659 375 aaKnown RBP2.43□□□□□ -2.02
SMC4-224ENST00000494612 GPR4P46093 362 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 PRLHRP49683 370 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 ATP5J2P56134 94 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 CMC4P56277 68 aaPredicted RBP2.43□□□□□ -2.02
SMC4-224ENST00000494612 YWHAEP62258 255 aaKnown RBP2.43□□□□□ -2.02
SMC4-224ENST00000494612 PAFAH1B2P68402 229 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 SLC25A35Q3KQZ1 300 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 Q6ZSR6 202 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 BHLHA15Q7RTS1 189 aaPredicted RBP2.43□□□□□ -2.02
SMC4-224ENST00000494612 IQCF2Q8IXL9 164 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 ST13P4Q8IZP2 240 aaPredicted RBP2.43□□□□□ -2.02
SMC4-224ENST00000494612 GATSQ8NAP1 163 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 C19orf18Q8NEA5 215 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 OR4M1Q8NGD0 313 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 OR4D6Q8NGJ1 314 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 RXFP2Q8WXD0 754 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 CACNG8Q8WXS5 425 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 TCEAL4Q96EI5 215 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 CPB2Q96IY4 423 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 RNF170Q96K19 258 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 KCNS1Q96KK3 526 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 KCNS3Q9BQ31 491 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 TREM1Q9NP99 234 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 TMEM100Q9NV29 134 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 ZNF229Q9UJW7 825 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 EML5Q05BV3 1969 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 GPR179Q6PRD1 2367 aa2.43□□□□□ -2.02
SMC4-224ENST00000494612 SETXQ7Z333 2677 aaKnown RBP2.43□□□□□ -2.02
SMC4-224ENST00000494612 VWA8A3KMH1 1905 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 BPTFQ12830 3046 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 ASH1LQ9NR48 2969 aaKnown RBP2.42□□□□□ -2.02
SMC4-224ENST00000494612 DSPP15924 2871 aaKnown RBP2.42□□□□□ -2.02
SMC4-224ENST00000494612 IGHV3-49A0A0A0MS15 119 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 SLC22A20A6NK97 555 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 A8MUU9 505 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 BTNL10A8MVZ5 291 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 E7EWF7 191 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 MANBAO00462 879 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 TRAPPC3O43617 180 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 PLIN3O60664 434 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 IGKV1-17P01599 117 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 KLK1P06870 262 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 CD9P21926 228 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 LCN1P31025 176 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 CCR2P41597 374 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 PSMC5P62195 406 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 LAMTOR4Q0VGL1 99 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 DNLZQ5SXM8 178 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 TPRG1LQ5T0D9 272 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 DEGS2Q6QHC5 323 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 CD300LGQ6UXG3 332 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 UNQ9165/PRO28630Q6UXU0 137 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 ASCL4Q6XD76 172 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 RBM45Q8IUH3 476 aaKnown RBP2.42□□□□□ -2.02
SMC4-224ENST00000494612 SLC30A8Q8IWU4 369 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 TSTD1Q8NFU3 115 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 DCAKDQ8WVC6 231 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 RCN3Q96D15 328 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 NAPGQ99747 312 aaPredicted RBP2.42□□□□□ -2.02
SMC4-224ENST00000494612 AGMATQ9BSE5 352 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 CHID1Q9BWS9 393 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 ZNF717Q9BY31 904 aaPredicted RBP2.42□□□□□ -2.02
SMC4-224ENST00000494612 REEP1Q9H902 201 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 C6orf50Q9HD87 102 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 S4R3C0 116 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms