RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 FOXJ3Q9UPW0 622 aa7.18□□□□□ -1.26
ITGB1-217ENST00000494395 IGHV1-69DA0A0B4J2H0 117 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 MDFIC2A0A1B0GVS7 189 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 RNASEK-C17orf49H0YIS7 233 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 OR2H2O95918 312 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 CYB5AP00167 134 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 IGHV1-69P01742 117 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 OCMP0CE72 109 aaPredicted RBP7.17□□□□□ -1.26
ITGB1-217ENST00000494395 TMEM225BP0DP42 221 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 CD37P11049 281 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 FPR2P25090 351 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 TGFBR2P37173 567 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 PTGFRP43088 359 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 OR3A1P47881 315 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 MTNR1BP49286 362 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 CAPZA1P52907 286 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 GABARAPL2P60520 117 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 RPL31P62899 125 aaKnown RBP7.17□□□□□ -1.26
ITGB1-217ENST00000494395 PPP3R1P63098 170 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 MLLT11Q13015 90 aaPredicted RBP7.17□□□□□ -1.26
ITGB1-217ENST00000494395 KLRD1Q13241 179 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 MED22Q15528 200 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 NHLRC3Q5JS37 347 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 FAM27D1Q5T7N8 215 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 GPR157Q5UAW9 335 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 TMEM200BQ69YZ2 307 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 BPIFB2Q8N4F0 458 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 MS4A15Q8N5U1 240 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 ASCC1Q8N9N2 400 aaKnown RBP7.17□□□□□ -1.26
ITGB1-217ENST00000494395 OR4S1Q8NGB4 309 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 ZFAND2BQ8WV99 257 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 TNFAIP8L1Q8WVP5 186 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 TMEM158Q8WZ71 300 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 THRSPQ92748 146 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 LHX4Q969G2 390 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 CPNE2Q96FN4 548 aaPredicted RBP7.17□□□□□ -1.26
ITGB1-217ENST00000494395 MS4A7Q9GZW8 240 aaPredicted RBP7.17□□□□□ -1.26
ITGB1-217ENST00000494395 PPIL3Q9H2H8 161 aaKnown RBP7.17□□□□□ -1.26
ITGB1-217ENST00000494395 CDIP1Q9H305 208 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 EXOSC4Q9NPD3 245 aaKnown RBP7.17□□□□□ -1.26
ITGB1-217ENST00000494395 NOX4Q9NPH5 578 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 SIRT7Q9NRC8 400 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 GSTK1Q9Y2Q3 226 aa7.17□□□□□ -1.26
ITGB1-217ENST00000494395 KIAA2026Q5HYC2 2103 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 A0A0G2JK05 382 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 A0A1W2PPK0 400 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 A0A1W2PQ09 198 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 DNAJC9-AS1A6NH13 148 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 RNF212BA8MTL3 300 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 C17orf98A8MV24 154 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 SLC33A1O00400 549 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-217ENST00000494395 SH2D1BO14796 132 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 MGST3O14880 152 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 MAGEB3O15480 346 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 CSN2P05814 226 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 UCHL1P09936 223 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 CCL3L1P16619 93 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 CPEP16870 476 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 PRTN3P24158 256 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 MAPK3P27361 379 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-217ENST00000494395 ERP29P30040 261 aaKnown RBP7.16□□□□□ -1.26
ITGB1-217ENST00000494395 ZNF93P35789 620 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-217ENST00000494395 MAP2K4P45985 399 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 SNU13P55769 128 aaKnown RBP7.16□□□□□ -1.26
ITGB1-217ENST00000494395 UBA52P62987 128 aaKnown RBP7.16□□□□□ -1.26
ITGB1-217ENST00000494395 PRB3Q04118 309 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-217ENST00000494395 MEF2CQ06413 473 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-217ENST00000494395 IL13RA2Q14627 380 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 DEFB112Q30KQ8 113 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 ACSM3Q53FZ2 586 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 LIPKQ5VXJ0 399 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 FIP1L1Q6UN15 594 aaKnown RBP7.16□□□□□ -1.26
ITGB1-217ENST00000494395 TMEM91Q6ZNR0 172 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 LRRTM1Q86UE6 522 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 SATL1Q86VE3 508 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 CDH26Q8IXH8 852 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 CMTM4Q8IZR5 234 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 FAM185AQ8N0U4 392 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 OR4M1Q8NGD0 313 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 OR5D13Q8NGL4 314 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 OR10K1Q8NGX5 313 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 GPER1Q99527 375 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 C19orf24Q9BVV8 132 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 CHST6Q9GZX3 395 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 METTL8Q9H825 291 aaKnown RBP7.16□□□□□ -1.26
ITGB1-217ENST00000494395 ACOT13Q9NPJ3 140 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 ZNF581Q9P0T4 197 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 BLOC1S6Q9UL45 172 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 COL6A5A8TX70 2615 aa7.16□□□□□ -1.26
ITGB1-217ENST00000494395 TRAV24A0A0B4J272 114 aa7.15□□□□□ -1.26
ITGB1-217ENST00000494395 A0A1W2PP11 408 aa7.15□□□□□ -1.26
ITGB1-217ENST00000494395 CLDN34H7C241 214 aa7.15□□□□□ -1.26
ITGB1-217ENST00000494395 SIRPB1O00241 398 aa7.15□□□□□ -1.26
ITGB1-217ENST00000494395 MRPS14O60783 128 aaKnown RBP7.15□□□□□ -1.26
ITGB1-217ENST00000494395 CDRT1O95170 752 aa7.15□□□□□ -1.26
ITGB1-217ENST00000494395 RBP4P02753 201 aa7.15□□□□□ -1.26
ITGB1-217ENST00000494395 MAS1P04201 325 aa7.15□□□□□ -1.26
ITGB1-217ENST00000494395 BMXP51813 675 aa7.15□□□□□ -1.26
ITGB1-217ENST00000494395 UBE2E1P51965 193 aa7.15□□□□□ -1.26
ITGB1-217ENST00000494395 RBM11P57052 281 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms