RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 LINC00052Q96N35 136 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 ALX4Q9H161 411 aaPredicted RBP17.76■□□□□ 0.43
RNF40-203ENST00000493683 PLA2G3Q9NZ20 509 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 SERGEFQ9UGK8 458 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 KLK10O43240 276 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 DNPH1O43598 174 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 CT62P0C5K7 136 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 PRSS41Q7RTY9 318 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 ZNF547Q8IVP9 402 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 DTD1Q8TEA8 209 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 PRNDQ9UKY0 176 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 BTAF1O14981 1849 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 BLNKQ8WV28 456 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 F5H697 171 aa17.75■□□□□ 0.43
RNF40-203ENST00000493683 EPHA8P29322 1005 aaPredicted RBP17.75■□□□□ 0.43
RNF40-203ENST00000493683 CBLN3Q6UW01 205 aa17.75■□□□□ 0.43
RNF40-203ENST00000493683 Q6ZS52 159 aa17.75■□□□□ 0.43
RNF40-203ENST00000493683 MIXL1Q9H2W2 232 aa17.75■□□□□ 0.43
RNF40-203ENST00000493683 OR4C45A6NMZ5 311 aa17.75■□□□□ 0.43
RNF40-203ENST00000493683 ACTL6AO96019 429 aa17.75■□□□□ 0.43
RNF40-203ENST00000493683 C9orf50Q5SZB4 431 aa17.75■□□□□ 0.43
RNF40-203ENST00000493683 FAM109BQ6ICB4 259 aaPredicted RBP17.75■□□□□ 0.43
RNF40-203ENST00000493683 ZNF253O75346 499 aa17.75■□□□□ 0.43
RNF40-203ENST00000493683 HAND1O96004 215 aa17.75■□□□□ 0.43
RNF40-203ENST00000493683 MPLP40238 635 aa17.75■□□□□ 0.43
RNF40-203ENST00000493683 RAB1CQ92928 201 aa17.75■□□□□ 0.43
RNF40-203ENST00000493683 IL22RA2Q969J5 263 aa17.75■□□□□ 0.43
RNF40-203ENST00000493683 MAP1LC3CQ9BXW4 147 aa17.75■□□□□ 0.43
RNF40-203ENST00000493683 PPYP01298 95 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 HYAL1Q12794 435 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 RPL7P18124 248 aaKnown RBP17.74■□□□□ 0.43
RNF40-203ENST00000493683 FGF8P55075 233 aaPredicted RBP17.74■□□□□ 0.43
RNF40-203ENST00000493683 FOXC1Q12948 553 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 FDX2Q6P4F2 183 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 UBALD1Q8TB05 177 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 DCAF16Q9NXF7 216 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 CHST1O43916 411 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 ERVS71-1P61550 626 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 COTL1Q14019 142 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 ZNF343Q6P1L6 599 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 Q6ZN92 141 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 TMEM116Q8NCL8 245 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 RAB1BQ9H0U4 201 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 TRPM3Q9HCF6 1732 aaPredicted RBP17.74■□□□□ 0.43
RNF40-203ENST00000493683 OR4A8P0C604 315 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 PPOXP50336 477 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 SLC35E3Q7Z769 313 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 NFAM1Q8NET5 270 aaPredicted RBP17.74■□□□□ 0.43
RNF40-203ENST00000493683 EID2BQ96D98 161 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 PACRGQ96M98 296 aaPredicted RBP17.74■□□□□ 0.43
RNF40-203ENST00000493683 FLRT3Q9NZU0 649 aa17.74■□□□□ 0.43
RNF40-203ENST00000493683 ACP1P24666 158 aa17.73■□□□□ 0.43
RNF40-203ENST00000493683 RPL30P62888 115 aaKnown RBP17.73■□□□□ 0.43
RNF40-203ENST00000493683 SPINK4O60575 86 aa17.73■□□□□ 0.43
RNF40-203ENST00000493683 OR10J1P30954 320 aa17.73■□□□□ 0.43
RNF40-203ENST00000493683 LYZP61626 148 aa17.73■□□□□ 0.43
RNF40-203ENST00000493683 SPNS3Q6ZMD2 512 aa17.73■□□□□ 0.43
RNF40-203ENST00000493683 ASCL5Q7RTU5 278 aa17.73■□□□□ 0.43
RNF40-203ENST00000493683 PRO1933Q9H354 126 aa17.73■□□□□ 0.43
RNF40-203ENST00000493683 J3QT63 122 aa17.73■□□□□ 0.43
RNF40-203ENST00000493683 TNFSF14O43557 240 aa17.73■□□□□ 0.43
RNF40-203ENST00000493683 OR4A4PQ8NGN8 299 aa17.73■□□□□ 0.43
RNF40-203ENST00000493683 RNF133Q8WVZ7 376 aa17.73■□□□□ 0.43
RNF40-203ENST00000493683 KNL1Q8NG31 2342 aa17.73■□□□□ 0.43
RNF40-203ENST00000493683 LGALSLQ3ZCW2 172 aaPredicted RBP17.73■□□□□ 0.43
RNF40-203ENST00000493683 C7orf77A4D0Y5 90 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 TMEM210A6NLX4 147 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 MPZL1O95297 269 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 P01737 135 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 BRS3P32247 399 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 DLK1P80370 383 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 WDR74Q6RFH5 385 aaPredicted RBP17.72■□□□□ 0.43
RNF40-203ENST00000493683 C5orf17Q8NAS9 161 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 PLPPR2Q96GM1 343 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 C1RLQ9NZP8 487 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 PITPNC1Q9UKF7 332 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 FFAR1O14842 300 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 CAMPP49913 170 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 EWSR1Q01844 656 aaKnown RBP eCLIP17.72■□□□□ 0.43
RNF40-203ENST00000493683 YBX1P67809 324 aaKnown RBP17.72■□□□□ 0.43
RNF40-203ENST00000493683 PSG6Q00889 435 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 HIST3H3Q16695 136 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 DRD3P35462 400 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 MMP16P51512 607 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 NAAAQ02083 359 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 C19orf57Q0VDD7 668 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 OR5AU1Q8NGC0 362 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 NTMQ9P121 344 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 HSPB8Q9UJY1 196 aa17.72■□□□□ 0.43
RNF40-203ENST00000493683 IGHV1OR15-9A0A0B4J2B8 117 aa17.71■□□□□ 0.43
RNF40-203ENST00000493683 A6NDN8 102 aa17.71■□□□□ 0.43
RNF40-203ENST00000493683 SOCS1O15524 211 aa17.71■□□□□ 0.43
RNF40-203ENST00000493683 PPIHO43447 177 aaKnown RBP17.71■□□□□ 0.43
RNF40-203ENST00000493683 ORM2P19652 201 aa17.71■□□□□ 0.43
RNF40-203ENST00000493683 TMEM204Q9BSN7 226 aa17.71■□□□□ 0.43
RNF40-203ENST00000493683 A0A087X0M5 115 aa17.71■□□□□ 0.43
RNF40-203ENST00000493683 IGHV3-43A0A0B4J1X8 118 aa17.71■□□□□ 0.43
RNF40-203ENST00000493683 CTXND1A0A1B0GTU2 59 aa17.71■□□□□ 0.43
RNF40-203ENST00000493683 A0A1B0GX30 115 aa17.71■□□□□ 0.43
RNF40-203ENST00000493683 CXorf1O96002 111 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms