RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 C1QL4Q86Z23 238 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 SERPINA12Q8IW75 414 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 CBR4Q8N4T8 237 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 C11orf44Q8N8P7 122 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 PXT1Q8NFP0 134 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 OR51T1Q8NGJ9 327 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 OR5D14Q8NGL3 314 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 ZNF596Q8TC21 504 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 HAVCR2Q8TDQ0 301 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 CREB3L1Q96BA8 519 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 MYCBPQ99417 103 aaPredicted RBP6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 SLC29A1Q99808 456 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 CITED2Q99967 270 aaPredicted RBP6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 GAL3ST2Q9H3Q3 398 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 ZCCHC4Q9H5U6 513 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 ISG20L2Q9H9L3 353 aaKnown RBP6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 ABCB10Q9NRK6 738 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 ERVK13-1Q9NX77 482 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 AASSQ9UDR5 926 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 GLS2Q9UI32 602 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 HILPDAQ9Y5L2 63 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 TRGV10A0A0A0MS01 117 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 KBTBD11-OT1A0A1B0GTJ5 212 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 LEUTXA8MZ59 168 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 OOSP1A8MZH6 123 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 NPIPB11E5RHQ5 1161 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 BUB1B-PAK6H3BSN5 160 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 SIRPB1O00241 398 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 SULT1B1O43704 296 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 INMTO95050 263 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 FADS2O95864 444 aaKnown RBP6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 ALDOBP05062 364 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 LIMS3P0CW19 117 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 LIMS4P0CW20 117 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 CALCBP10092 127 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 CDK2P24941 298 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 MTNR1BP49286 362 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 SLC34A1Q06495 639 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 DYNC1I2Q13409 638 aaKnown RBP6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 HLA-DRB5Q30154 266 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 ZIK1Q3SY52 487 aaPredicted RBP6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 CCDC58Q4VC31 144 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 PLA1AQ53H76 456 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 UTF1Q5T230 341 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 LPCAT4Q643R3 524 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 REC114Q7Z4M0 266 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 LHFPL3Q86UP9 236 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 C10orf67Q8IYJ2 551 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 OR13C3Q8NGS6 347 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 OR13C9Q8NGT0 318 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 OR5AK2Q8NH90 309 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 APH1BQ8WW43 257 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 RGP1Q92546 391 aaPredicted RBP6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 MRPL48Q96GC5 212 aaKnown RBP6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 Q96MT0 163 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 RBM14Q96PK6 669 aaKnown RBP6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 SPACA5Q96QH8 159 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 ALG8Q9BVK2 526 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 MMP28Q9H239 520 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 IFT22Q9H7X7 185 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 FGF20Q9NP95 211 aaPredicted RBP6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 EXOSC4Q9NPD3 245 aaKnown RBP6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 FAM118AQ9NWS6 357 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 GSTK1Q9Y2Q3 226 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 ZNF281Q9Y2X9 895 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 ORC6Q9Y5N6 252 aa6.69□□□□□ -1.34
SMARCB1-207ENST00000491967 TRAV24A0A0B4J272 114 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 LOC100130705A0A1B0GUX0 176 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 ZNF729A6NN14 1252 aaPredicted RBP6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 F2RL2O00254 374 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 DEGS1O15121 323 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 XPNPEP2O43895 674 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 WBP4O75554 376 aaKnown RBP6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 OR2F2O95006 317 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 CCDC159P0C7I6 412 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 BRS3P32247 399 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 KLHL22Q53GT1 634 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 NHLRC3Q5JS37 347 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 TPTE2P1Q5T6R2 138 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 PRAMEF5Q5TYX0 476 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 ZNF691Q5VV52 312 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 Q6ZPA2 131 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 SLC16A12Q6ZSM3 486 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 OR4F17Q8NGA8 305 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 OR52I1Q8NGK6 324 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 NDNFQ8TB73 568 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 RFT1Q96AA3 541 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 KIRREL1Q96J84 757 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 OR4F4Q96R69 305 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 NKX3-1Q99801 234 aaPredicted RBP6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 PDCD1LG2Q9BQ51 273 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 C9orf16Q9BUW7 83 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 ZNF286AQ9HBT8 521 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 NEK6Q9HC98 313 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 IL36GQ9NZH8 169 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 OR6C3Q9NZP0 311 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 RPL36Q9Y3U8 105 aaKnown RBP6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 GMPPBQ9Y5P6 360 aa6.68□□□□□ -1.34
SMARCB1-207ENST00000491967 H3BUI4 141 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms