RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 KMOO15229 486 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 RP2O75695 350 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 SNRPAP09012 282 aaKnown RBP2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 ALOX5APP20292 161 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 ALDH3A1P30838 453 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 RCVRNP35243 200 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 CEACAM6P40199 344 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 GCLMP48507 274 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 RWDD2BP57060 319 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 RPS23P62266 143 aaKnown RBP2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 CACNG7P62955 275 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 SMAGPQ0VAQ4 97 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 LAMTOR4Q0VGL1 99 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 PPP1R1AQ13522 171 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 FAM53BQ14153 422 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 NANOGP8Q6NSW7 305 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 TNFAIP8L2Q6P589 184 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 TEX43Q6ZNM6 134 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 RASSF6Q6ZTQ3 369 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 SLC51BQ86UW2 128 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR6V1Q8N148 313 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR4C13Q8NGP0 309 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR11L1Q8NGX0 322 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR10J6PQ8NGY7 276 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 RGP1Q92546 391 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 TEAD3Q99594 435 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 NDFIP1Q9BT67 221 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 PECRQ9BY49 303 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 NOX3Q9HBY0 568 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 DDX19AQ9NUU7 478 aaKnown RBP2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 TMEM100Q9NV29 134 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 RBM22Q9NW64 420 aaKnown RBP eCLIP2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 VPS29Q9UBQ0 182 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 MTFP1Q9UDX5 166 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 VAX2Q9UIW0 290 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 FBXO5Q9UKT4 447 aa2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 LSM5Q9Y4Y9 91 aaKnown RBP2.9□□□□□ -1.95
HMGB1P38-201ENST00000490557 IGHV3OR16-9A0A0B4J2B5 98 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 CENPVL3A0A0U1RRI6 287 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 A0A1B0GV72 72 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 A0A1W2PP18 115 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 PLAC8L1A1L4L8 177 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 FUOMA2VDF0 154 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 SMIM9A6NGZ8 99 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 C2orf74A8MZ97 194 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 HMGN1P05114 100 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 CD5P06127 495 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 CBR1P16152 277 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 MYL12AP19105 171 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 OMGP23515 440 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 TSPOP30536 169 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 P2RX1P51575 399 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 PSME3P61289 254 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR2F1Q13607 317 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 POU6F1Q14863 301 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 SHHQ15465 462 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 PRSS8Q16651 343 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 HIST3H3Q16695 136 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 LINC00483Q53H64 154 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 KCTD16Q68DU8 428 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 LAMTOR1Q6IAA8 161 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 XKRXQ6PP77 449 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 LYPD2Q6UXB3 125 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 FAM183BPQ6ZVS7 135 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 STRADAQ7RTN6 431 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 LYG2Q86SG7 212 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 COMMD7Q86VX2 200 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 PRSS58Q8IYP2 241 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 ZNF561Q8N587 486 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 GATD1Q8NB37 220 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR11H7Q8NGC8 314 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR10AD1Q8NGE0 317 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR10X1Q8NGY0 326 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR6K3Q8NGY3 331 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR13G1Q8NGZ3 307 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR1S1Q8NH92 325 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 CYGBQ8WWM9 190 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 RASSF5Q8WWW0 418 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 METTL26Q96S19 204 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 ASB7Q9H672 318 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 EDA2RQ9HAV5 297 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 RRAGDQ9NQL2 400 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 ZNF391Q9UJN7 358 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 F11RQ9Y624 299 aaKnown RBP2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 SNAPC4Q5SXM2 1469 aa2.89□□□□□ -1.95
HMGB1P38-201ENST00000490557 TGIF2-C20orf24A0A0A6YYL0 155 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 TRAV8-6A0A0B4J262 113 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 TMEM150BA6NC51 233 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 RBFOX3A6NFN3 312 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 CLDN24A6NM45 220 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 DISC1C4P0D8 188 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 INS-IGF2F8WCM5 200 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 I3L4J1 428 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 MFNGO00587 321 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 REM1O75628 298 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR2B3O76000 313 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 IGKV5-2P06315 115 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 CTSLP07711 333 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 M6PRP20645 277 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 PAX6P26367 422 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms