RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 OR5M11Q96RB7 305 aa18.16■□□□□ 0.5
PTPN4-211ENST00000488279 ERVK13-1Q9NX77 482 aa18.16■□□□□ 0.5
PTPN4-211ENST00000488279 LOC100130705A0A1B0GUX0 176 aa18.15■□□□□ 0.5
PTPN4-211ENST00000488279 ODAMA1E959 279 aa18.15■□□□□ 0.5
PTPN4-211ENST00000488279 SULT1B1O43704 296 aa18.15■□□□□ 0.5
PTPN4-211ENST00000488279 ALDOBP05062 364 aa18.15■□□□□ 0.5
PTPN4-211ENST00000488279 CSN2P05814 226 aa18.15■□□□□ 0.5
PTPN4-211ENST00000488279 CCDC159P0C7I6 412 aa18.15■□□□□ 0.5
PTPN4-211ENST00000488279 GBX2P52951 348 aaPredicted RBP18.15■□□□□ 0.5
PTPN4-211ENST00000488279 KRBOX4Q5JUW0 171 aa18.15■□□□□ 0.5
PTPN4-211ENST00000488279 Q6P435 159 aa18.15■□□□□ 0.5
PTPN4-211ENST00000488279 LYG1Q8N1E2 194 aa18.15■□□□□ 0.5
PTPN4-211ENST00000488279 STMN2Q93045 179 aa18.15■□□□□ 0.5
PTPN4-211ENST00000488279 PDCD1LG2Q9BQ51 273 aa18.15■□□□□ 0.5
PTPN4-211ENST00000488279 WNT10AQ9GZT5 417 aa18.15■□□□□ 0.5
PTPN4-211ENST00000488279 DHDHQ9UQ10 334 aa18.15■□□□□ 0.5
PTPN4-211ENST00000488279 RPL36Q9Y3U8 105 aaKnown RBP18.15■□□□□ 0.5
PTPN4-211ENST00000488279 DSCAML1Q8TD84 2053 aa18.14■□□□□ 0.5
PTPN4-211ENST00000488279 G3V4G9 280 aa18.14■□□□□ 0.49
PTPN4-211ENST00000488279 SLC33A1O00400 549 aaPredicted RBP18.14■□□□□ 0.49
PTPN4-211ENST00000488279 BRS3P32247 399 aa18.14■□□□□ 0.49
PTPN4-211ENST00000488279 ARHGDIBP52566 201 aa18.14■□□□□ 0.49
PTPN4-211ENST00000488279 BAIAP2L2Q6UXY1 529 aa18.14■□□□□ 0.49
PTPN4-211ENST00000488279 Q6ZS46 218 aa18.14■□□□□ 0.49
PTPN4-211ENST00000488279 NDUFA11Q86Y39 141 aa18.14■□□□□ 0.49
PTPN4-211ENST00000488279 OR4D6Q8NGJ1 314 aa18.14■□□□□ 0.49
PTPN4-211ENST00000488279 HAVCR2Q8TDQ0 301 aa18.14■□□□□ 0.49
PTPN4-211ENST00000488279 TSEN15Q8WW01 171 aaKnown RBP18.14■□□□□ 0.49
PTPN4-211ENST00000488279 SLC29A1Q99808 456 aa18.14■□□□□ 0.49
PTPN4-211ENST00000488279 ZNF649Q9BS31 505 aa18.14■□□□□ 0.49
PTPN4-211ENST00000488279 ING3Q9NXR8 418 aa18.14■□□□□ 0.49
PTPN4-211ENST00000488279 LEUTXA8MZ59 168 aa18.13■□□□□ 0.49
PTPN4-211ENST00000488279 E9PI62 339 aa18.13■□□□□ 0.49
PTPN4-211ENST00000488279 TOR1AO14656 332 aa18.13■□□□□ 0.49
PTPN4-211ENST00000488279 PTGFRP43088 359 aa18.13■□□□□ 0.49
PTPN4-211ENST00000488279 VDAC2P45880 294 aaPredicted RBP18.13■□□□□ 0.49
PTPN4-211ENST00000488279 MTNR1BP49286 362 aa18.13■□□□□ 0.49
PTPN4-211ENST00000488279 ZP1P60852 638 aa18.13■□□□□ 0.49
PTPN4-211ENST00000488279 KLHL22Q53GT1 634 aa18.13■□□□□ 0.49
PTPN4-211ENST00000488279 ZNF691Q5VV52 312 aa18.13■□□□□ 0.49
PTPN4-211ENST00000488279 OR52I1Q8NGK6 324 aa18.13■□□□□ 0.49
PTPN4-211ENST00000488279 WIPF2Q8TF74 440 aaPredicted RBP18.13■□□□□ 0.49
PTPN4-211ENST00000488279 CREB3L1Q96BA8 519 aa18.13■□□□□ 0.49
PTPN4-211ENST00000488279 CPNE2Q96FN4 548 aaPredicted RBP18.13■□□□□ 0.49
PTPN4-211ENST00000488279 AKR1E2Q96JD6 320 aa18.13■□□□□ 0.49
PTPN4-211ENST00000488279 S100A14Q9HCY8 104 aa18.13■□□□□ 0.49
PTPN4-211ENST00000488279 MRPS18AQ9NVS2 196 aaKnown RBP18.13■□□□□ 0.49
PTPN4-211ENST00000488279 FAM118AQ9NWS6 357 aa18.13■□□□□ 0.49
PTPN4-211ENST00000488279 OR6C3Q9NZP0 311 aa18.13■□□□□ 0.49
PTPN4-211ENST00000488279 MAGEB3O15480 346 aa18.12■□□□□ 0.49
PTPN4-211ENST00000488279 IGLV1-47P01700 117 aa18.12■□□□□ 0.49
PTPN4-211ENST00000488279 PRRX1P54821 245 aa18.12■□□□□ 0.49
PTPN4-211ENST00000488279 CDK5R1Q15078 307 aa18.12■□□□□ 0.49
PTPN4-211ENST00000488279 C16orf82Q7Z2V1 217 aa18.12■□□□□ 0.49
PTPN4-211ENST00000488279 OR4F17Q8NGA8 305 aa18.12■□□□□ 0.49
PTPN4-211ENST00000488279 CAPSLQ8WWF8 208 aa18.12■□□□□ 0.49
PTPN4-211ENST00000488279 COQ2Q96H96 371 aa18.12■□□□□ 0.49
PTPN4-211ENST00000488279 OR4F4Q96R69 305 aa18.12■□□□□ 0.49
PTPN4-211ENST00000488279 CITED2Q99967 270 aaPredicted RBP18.12■□□□□ 0.49
PTPN4-211ENST00000488279 FAM172BPA6NC97 362 aa18.11■□□□□ 0.49
PTPN4-211ENST00000488279 RAB3AP20336 220 aa18.11■□□□□ 0.49
PTPN4-211ENST00000488279 CD24P25063 80 aa18.11■□□□□ 0.49
PTPN4-211ENST00000488279 CD34P28906 385 aa18.11■□□□□ 0.49
PTPN4-211ENST00000488279 GDNFP39905 211 aa18.11■□□□□ 0.49
PTPN4-211ENST00000488279 CEACAM3P40198 252 aa18.11■□□□□ 0.49
PTPN4-211ENST00000488279 ATXN7L3Q14CW9 347 aaPredicted RBP18.11■□□□□ 0.49
PTPN4-211ENST00000488279 BEAN1Q3B7T3 259 aa18.11■□□□□ 0.49
PTPN4-211ENST00000488279 SAMD5Q5TGI4 173 aa18.11■□□□□ 0.49
PTPN4-211ENST00000488279 ELP2Q6IA86 826 aa18.11■□□□□ 0.49
PTPN4-211ENST00000488279 SATL1Q86VE3 508 aa18.11■□□□□ 0.49
PTPN4-211ENST00000488279 ZNF565Q8N9K5 539 aa18.11■□□□□ 0.49
PTPN4-211ENST00000488279 PXT1Q8NFP0 134 aa18.11■□□□□ 0.49
PTPN4-211ENST00000488279 R3HDM4Q96D70 268 aa18.11■□□□□ 0.49
PTPN4-211ENST00000488279 NR1H4Q96RI1 486 aaPredicted RBP18.11■□□□□ 0.49
PTPN4-211ENST00000488279 OCSTAMPQ9BR26 566 aa18.11■□□□□ 0.49
PTPN4-211ENST00000488279 LIN7BQ9HAP6 207 aa18.11■□□□□ 0.49
PTPN4-211ENST00000488279 ZNF286AQ9HBT8 521 aa18.11■□□□□ 0.49
PTPN4-211ENST00000488279 ZNF729A6NN14 1252 aaPredicted RBP18.1■□□□□ 0.49
PTPN4-211ENST00000488279 H0YJX3 145 aa18.1■□□□□ 0.49
PTPN4-211ENST00000488279 XPNPEP2O43895 674 aa18.1■□□□□ 0.49
PTPN4-211ENST00000488279 PQLC1Q8N2U9 271 aa18.1■□□□□ 0.49
PTPN4-211ENST00000488279 OR51T1Q8NGJ9 327 aa18.1■□□□□ 0.49
PTPN4-211ENST00000488279 GPER1Q99527 375 aa18.1■□□□□ 0.49
PTPN4-211ENST00000488279 MMP28Q9H239 520 aa18.1■□□□□ 0.49
PTPN4-211ENST00000488279 A0A087X0M5 115 aa18.09■□□□□ 0.49
PTPN4-211ENST00000488279 KBTBD11-OT1A0A1B0GTJ5 212 aa18.09■□□□□ 0.49
PTPN4-211ENST00000488279 A0A1B0GX30 115 aa18.09■□□□□ 0.49
PTPN4-211ENST00000488279 BUB1B-PAK6H3BSN5 160 aa18.09■□□□□ 0.49
PTPN4-211ENST00000488279 HSPB6O14558 160 aa18.09■□□□□ 0.49
PTPN4-211ENST00000488279 GTF2A1P52655 376 aaPredicted RBP18.09■□□□□ 0.49
PTPN4-211ENST00000488279 C17orf58Q2M2W7 97 aa18.09■□□□□ 0.49
PTPN4-211ENST00000488279 TMEM95Q3KNT9 176 aa18.09■□□□□ 0.49
PTPN4-211ENST00000488279 KPRPQ5T749 579 aaPredicted RBP18.09■□□□□ 0.49
PTPN4-211ENST00000488279 LPCAT4Q643R3 524 aa18.09■□□□□ 0.49
PTPN4-211ENST00000488279 OR5AU1Q8NGC0 362 aa18.09■□□□□ 0.49
PTPN4-211ENST00000488279 BARHL1Q9BZE3 327 aa18.09■□□□□ 0.49
PTPN4-211ENST00000488279 PPIL3Q9H2H8 161 aaKnown RBP18.09■□□□□ 0.49
PTPN4-211ENST00000488279 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.09■□□□□ 0.49
PTPN4-211ENST00000488279 LIMS3P0CW19 117 aa18.08■□□□□ 0.48
PTPN4-211ENST00000488279 LIMS4P0CW20 117 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms