RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 C3orf80F5H4A9 247 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 GPR31O00270 319 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 ADAM20O43506 726 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 MSMO1Q15800 293 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 MS4A7Q9GZW8 240 aaPredicted RBP11.48□□□□□ -0.57
HMGN1-216ENST00000486741 NAA60Q9H7X0 242 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 SLC2A9Q9NRM0 540 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 FAM24AA6NFZ4 105 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 SYNGR1O43759 233 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 IFNA10P01566 189 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 POLR2GP62487 172 aaKnown RBP eCLIP11.48□□□□□ -0.57
HMGN1-216ENST00000486741 COL19A1Q14993 1142 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 PEA15Q15121 130 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 SLC25A40Q8TBP6 338 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 PLK3Q9H4B4 646 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 CCL28Q9NRJ3 127 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 KIF25Q9UIL4 384 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 SNAPINO95295 136 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 ACTL6AO96019 429 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 CEACAM6P40199 344 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 TMEM50BP56557 158 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 AVPI1Q5T686 147 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 TPRX1Q8N7U7 411 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 LINC00052Q96N35 136 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 FOXG1P55316 489 aaPredicted RBP11.47□□□□□ -0.57
HMGN1-216ENST00000486741 FAM3AP98173 230 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 HAGHQ16775 308 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 RGS7BPQ6MZT1 257 aaPredicted RBP11.47□□□□□ -0.57
HMGN1-216ENST00000486741 RBMXL1Q96E39 390 aaKnown RBP11.47□□□□□ -0.57
HMGN1-216ENST00000486741 FBXL17Q9UF56 701 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 IGKV1-9A0A0C4DH69 117 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 ZFP92A6NM28 416 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 PPYP01298 95 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 SELEP16581 610 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 TLE1Q04724 770 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 MZT1Q08AG7 82 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 ZNF266Q14584 549 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 TECTAO75443 2155 aa11.47□□□□□ -0.57
HMGN1-216ENST00000486741 HEATR1Q9H583 2144 aaKnown RBP11.47□□□□□ -0.57
HMGN1-216ENST00000486741 C3orf85A0A1B0GTC6 90 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 RHEBQ15382 184 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 TESK1Q15569 626 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 LCN15Q6UWW0 184 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 GAPTQ8N292 157 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 MRGPRDQ8TDS7 321 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 TECTBQ96PL2 329 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 LY6G6EA0A0G2JKS1 128 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 ACTL6BO94805 426 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 FCGR3AP08637 254 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 PRF1P14222 555 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 IGFBP3P17936 291 aaPredicted RBP11.46□□□□□ -0.57
HMGN1-216ENST00000486741 ZBTB25P24278 435 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 OR3A1P47881 315 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 TMEM33P57088 247 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 C10orf128Q5T292 105 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 FDCSPQ8NFU4 85 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 FGFBP3Q8TAT2 258 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 ALX4Q9H161 411 aaPredicted RBP11.46□□□□□ -0.57
HMGN1-216ENST00000486741 HEYLQ9NQ87 328 aaPredicted RBP11.46□□□□□ -0.57
HMGN1-216ENST00000486741 TP53TG5Q9Y2B4 290 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 U3KQA8 63 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 MUC6Q6W4X9 2439 aa11.46□□□□□ -0.57
HMGN1-216ENST00000486741 A0A0C4DFX4 3053 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 H7C1Q1 480 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 SLC25A53Q5H9E4 307 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 PRSS54Q6PEW0 395 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 THNSL2Q86YJ6 484 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 TMEM54Q969K7 222 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 TCEAL7Q9BRU2 100 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 CDH23Q9H251 3354 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 C5orf66Q9H5L9 145 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 SEMA5BQ9P283 1151 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 ATP23Q9Y6H3 246 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 ZNF705GA8MUZ8 300 aaPredicted RBP11.46□□□□□ -0.58
HMGN1-216ENST00000486741 Q0VFX4 171 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 SOHLH1Q5JUK2 328 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 ZNF385CQ66K41 422 aaPredicted RBP11.46□□□□□ -0.58
HMGN1-216ENST00000486741 PAQR4Q8N4S7 273 aaPredicted RBP11.46□□□□□ -0.58
HMGN1-216ENST00000486741 NKX6-2Q9C056 277 aaPredicted RBP11.46□□□□□ -0.58
HMGN1-216ENST00000486741 OR5AC2Q9NZP5 309 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 GPR132Q9UNW8 380 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 PRELID3BQ9Y3B1 194 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 SHANK1Q9Y566 2161 aa11.46□□□□□ -0.58
HMGN1-216ENST00000486741 ZNF891A8MT65 544 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-216ENST00000486741 RNF212BA8MTL3 300 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 CYTIPO60759 359 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 CTSDP07339 412 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-216ENST00000486741 SCTP09683 121 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 ADAM5Q6NVV9 412 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 ZNF826PQ6ZT77 177 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 TBC1D26Q86UD7 250 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 MRPS24Q96EL2 167 aaKnown RBP11.45□□□□□ -0.58
HMGN1-216ENST00000486741 ZNF703Q9H7S9 590 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-216ENST00000486741 RPS10-NUDT3A0A1W2PQS6 291 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 HOXA6P31267 233 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 RPS10P46783 165 aaKnown RBP11.45□□□□□ -0.58
HMGN1-216ENST00000486741 RBM11P57052 281 aaKnown RBP11.45□□□□□ -0.58
HMGN1-216ENST00000486741 BAXQ07812 192 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 IGFBP7Q16270 282 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 ANKRD55Q3KP44 614 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms