RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 CLPXO76031 633 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 IGHV2-5P01817 119 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 TK1P04183 234 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 GLAP06280 429 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 CDK2P24941 298 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 LMO4P61968 165 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 PAN3Q58A45 887 aaKnown RBP14.62□□□□□ -0.07
CHMP3-207ENST00000485465 PLAC9Q5JTB6 97 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 NKAPLQ5M9Q1 402 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 BRICD5Q6PL45 260 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 ZNF841Q6ZN19 808 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 Q6ZTK2 550 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 NLRC3Q7RTR2 1065 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 TMEM185AQ8NFB2 350 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 OR8B3Q8NGG8 313 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 PPP1R35Q8TAP8 253 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 RAB3CQ96E17 227 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 OR8B2Q96RD0 313 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 NUDT16L1Q9BRJ7 211 aaKnown RBP14.62□□□□□ -0.07
CHMP3-207ENST00000485465 SHARPINQ9H0F6 387 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 FAM234AQ9H0X4 552 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 HSF4Q9ULV5 492 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 A0A096LNT2 108 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 MCRIP1C9JLW8 97 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 HSPB6O14558 160 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 DVL1O14640 695 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 XRCC3O43542 346 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 NDUFB3O43676 98 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 FCN3O75636 299 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 USF1P22415 310 aaPredicted RBP14.61□□□□□ -0.07
CHMP3-207ENST00000485465 OR3A1P47881 315 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 LRRC10Q5BKY1 277 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 C6orf201Q7Z4U5 140 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 RTN4RL2Q86UN3 420 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 BPIFB2Q8N4F0 458 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 DTX3Q8N9I9 347 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 WFDC11Q8NEX6 87 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 OR4S1Q8NGB4 309 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 OR5D13Q8NGL4 314 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 ARHGAP5-AS1Q96IT6 56 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 PECRQ9BY49 303 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 CHST6Q9GZX3 395 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 PPA2Q9H2U2 334 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 PLEKHJ1Q9NW61 149 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 SLC25A10Q9UBX3 287 aaPredicted RBP14.61□□□□□ -0.07
CHMP3-207ENST00000485465 ITGB1BP2Q9UKP3 347 aa14.61□□□□□ -0.07
CHMP3-207ENST00000485465 TRAV18A0A075B6X5 111 aa14.6□□□□□ -0.07
CHMP3-207ENST00000485465 HIST1H1DP16402 221 aaKnown RBP14.6□□□□□ -0.07
CHMP3-207ENST00000485465 TNFSF8P32971 234 aa14.6□□□□□ -0.07
CHMP3-207ENST00000485465 S100A5P33763 92 aa14.6□□□□□ -0.07
CHMP3-207ENST00000485465 RBM39Q14498 530 aaKnown RBP14.6□□□□□ -0.07
CHMP3-207ENST00000485465 GRK1Q15835 563 aa14.6□□□□□ -0.07
CHMP3-207ENST00000485465 OR8H2Q8N162 312 aa14.6□□□□□ -0.07
CHMP3-207ENST00000485465 FGFRL1Q8N441 504 aa14.6□□□□□ -0.07
CHMP3-207ENST00000485465 OR4M1Q8NGD0 313 aa14.6□□□□□ -0.07
CHMP3-207ENST00000485465 OR6Q1Q8NGQ2 317 aa14.6□□□□□ -0.07
CHMP3-207ENST00000485465 RAB39BQ96DA2 213 aa14.6□□□□□ -0.07
CHMP3-207ENST00000485465 CYYR1Q96J86 154 aa14.6□□□□□ -0.07
CHMP3-207ENST00000485465 WDFY2Q96P53 400 aa14.6□□□□□ -0.07
CHMP3-207ENST00000485465 SULT4A1Q9BR01 284 aa14.6□□□□□ -0.07
CHMP3-207ENST00000485465 FAAP24Q9BTP7 215 aa14.6□□□□□ -0.07
CHMP3-207ENST00000485465 REG4Q9BYZ8 158 aa14.6□□□□□ -0.07
CHMP3-207ENST00000485465 EXTL2Q9UBQ6 330 aa14.6□□□□□ -0.07
CHMP3-207ENST00000485465 UBE2QL1A1L167 161 aa14.59□□□□□ -0.07
CHMP3-207ENST00000485465 RNF223E7ERA6 249 aa14.59□□□□□ -0.07
CHMP3-207ENST00000485465 MFNGO00587 321 aa14.59□□□□□ -0.07
CHMP3-207ENST00000485465 MGST3O14880 152 aa14.59□□□□□ -0.07
CHMP3-207ENST00000485465 CSN2P05814 226 aa14.59□□□□□ -0.07
CHMP3-207ENST00000485465 GNB3P16520 340 aa14.59□□□□□ -0.07
CHMP3-207ENST00000485465 KCNJ3P48549 501 aa14.59□□□□□ -0.07
CHMP3-207ENST00000485465 NPY4RP50391 375 aa14.59□□□□□ -0.07
CHMP3-207ENST00000485465 SEC61A1P61619 476 aaKnown RBP14.59□□□□□ -0.07
CHMP3-207ENST00000485465 CDNFQ49AH0 187 aa14.59□□□□□ -0.07
CHMP3-207ENST00000485465 TMEM69Q5SWH9 247 aa14.59□□□□□ -0.07
CHMP3-207ENST00000485465 WDR25Q64LD2 544 aaPredicted RBP14.59□□□□□ -0.07
CHMP3-207ENST00000485465 CNIH2Q6PI25 160 aa14.59□□□□□ -0.07
CHMP3-207ENST00000485465 IZUMO1Q8IYV9 350 aa14.59□□□□□ -0.07
CHMP3-207ENST00000485465 NEK7Q8TDX7 302 aa14.59□□□□□ -0.07
CHMP3-207ENST00000485465 DIRAS2Q96HU8 199 aa14.59□□□□□ -0.07
CHMP3-207ENST00000485465 ZMAT3Q9HA38 289 aaKnown RBP14.59□□□□□ -0.07
CHMP3-207ENST00000485465 CLN8Q9UBY8 286 aa14.59□□□□□ -0.07
CHMP3-207ENST00000485465 KCNK7Q9Y2U2 307 aa14.59□□□□□ -0.07
CHMP3-207ENST00000485465 HEXAP06865 529 aa14.58□□□□□ -0.08
CHMP3-207ENST00000485465 NDUFB7P17568 137 aa14.58□□□□□ -0.08
CHMP3-207ENST00000485465 IL2RGP31785 369 aa14.58□□□□□ -0.08
CHMP3-207ENST00000485465 TALDO1P37837 337 aa14.58□□□□□ -0.08
CHMP3-207ENST00000485465 TAS2R20P59543 309 aa14.58□□□□□ -0.08
CHMP3-207ENST00000485465 GNB2P62879 340 aa14.58□□□□□ -0.08
CHMP3-207ENST00000485465 LOXL1Q08397 574 aaPredicted RBP14.58□□□□□ -0.08
CHMP3-207ENST00000485465 ATXN7L3Q14CW9 347 aaPredicted RBP14.58□□□□□ -0.08
CHMP3-207ENST00000485465 ARL6IP1Q15041 203 aa14.58□□□□□ -0.08
CHMP3-207ENST00000485465 ZNF260Q3ZCT1 412 aa14.58□□□□□ -0.08
CHMP3-207ENST00000485465 ESCO2Q56NI9 601 aa14.58□□□□□ -0.08
CHMP3-207ENST00000485465 OLFML2AQ68BL7 652 aa14.58□□□□□ -0.08
CHMP3-207ENST00000485465 GDPD3Q7L5L3 318 aa14.58□□□□□ -0.08
CHMP3-207ENST00000485465 PLPPR1Q8TBJ4 325 aa14.58□□□□□ -0.08
CHMP3-207ENST00000485465 ST8SIA4Q92187 359 aa14.58□□□□□ -0.08
CHMP3-207ENST00000485465 SSBP3Q9BWW4 388 aaPredicted RBP14.58□□□□□ -0.08
CHMP3-207ENST00000485465 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.58□□□□□ -0.08
CHMP3-207ENST00000485465 ETAA1Q9NY74 926 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms