RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 Q6P435 159 aa17.27■□□□□ 0.36
USP40-215ENST00000484528 MRPL48Q96GC5 212 aaKnown RBP17.27■□□□□ 0.36
USP40-215ENST00000484528 PDCD1LG2Q9BQ51 273 aa17.27■□□□□ 0.36
USP40-215ENST00000484528 PPIL3Q9H2H8 161 aaKnown RBP17.27■□□□□ 0.36
USP40-215ENST00000484528 FUOMA2VDF0 154 aa17.26■□□□□ 0.35
USP40-215ENST00000484528 SLC33A1O00400 549 aaPredicted RBP17.26■□□□□ 0.35
USP40-215ENST00000484528 SULT1B1O43704 296 aa17.26■□□□□ 0.35
USP40-215ENST00000484528 ZFPL1O95159 310 aa17.26■□□□□ 0.35
USP40-215ENST00000484528 LMO1P25800 156 aa17.26■□□□□ 0.35
USP40-215ENST00000484528 PTGFRP43088 359 aa17.26■□□□□ 0.35
USP40-215ENST00000484528 ZP1P60852 638 aa17.26■□□□□ 0.35
USP40-215ENST00000484528 BDH1Q02338 343 aa17.26■□□□□ 0.35
USP40-215ENST00000484528 EMX1Q04741 257 aaPredicted RBP17.26■□□□□ 0.35
USP40-215ENST00000484528 KISS1Q15726 138 aa17.26■□□□□ 0.35
USP40-215ENST00000484528 KPRPQ5T749 579 aaPredicted RBP17.26■□□□□ 0.35
USP40-215ENST00000484528 OR52W1Q6IF63 320 aa17.26■□□□□ 0.35
USP40-215ENST00000484528 SAXO1Q8IYX7 474 aa17.26■□□□□ 0.35
USP40-215ENST00000484528 ZNF596Q8TC21 504 aa17.26■□□□□ 0.35
USP40-215ENST00000484528 TSEN15Q8WW01 171 aaKnown RBP17.26■□□□□ 0.35
USP40-215ENST00000484528 CORO2AQ92828 525 aa17.26■□□□□ 0.35
USP40-215ENST00000484528 OCSTAMPQ9BR26 566 aa17.26■□□□□ 0.35
USP40-215ENST00000484528 TAS2R3Q9NYW6 316 aa17.26■□□□□ 0.35
USP40-215ENST00000484528 SH2D7A6NKC9 451 aaPredicted RBP17.25■□□□□ 0.35
USP40-215ENST00000484528 DEGS1O15121 323 aa17.25■□□□□ 0.35
USP40-215ENST00000484528 IGLV1-47P01700 117 aa17.25■□□□□ 0.35
USP40-215ENST00000484528 ALDOBP05062 364 aa17.25■□□□□ 0.35
USP40-215ENST00000484528 RBM39Q14498 530 aaKnown RBP17.25■□□□□ 0.35
USP40-215ENST00000484528 CDK5R1Q15078 307 aa17.25■□□□□ 0.35
USP40-215ENST00000484528 ZSCAN26Q16670 478 aa17.25■□□□□ 0.35
USP40-215ENST00000484528 ZFP1Q6P2D0 407 aa17.25■□□□□ 0.35
USP40-215ENST00000484528 RTN4RL2Q86UN3 420 aa17.25■□□□□ 0.35
USP40-215ENST00000484528 SYS1Q8N2H4 156 aa17.25■□□□□ 0.35
USP40-215ENST00000484528 OR4F17Q8NGA8 305 aa17.25■□□□□ 0.35
USP40-215ENST00000484528 OR5AK2Q8NH90 309 aa17.25■□□□□ 0.35
USP40-215ENST00000484528 STMN2Q93045 179 aa17.25■□□□□ 0.35
USP40-215ENST00000484528 OR4F4Q96R69 305 aa17.25■□□□□ 0.35
USP40-215ENST00000484528 NR1H4Q96RI1 486 aaPredicted RBP17.25■□□□□ 0.35
USP40-215ENST00000484528 SLC25A33Q9BSK2 321 aa17.25■□□□□ 0.35
USP40-215ENST00000484528 ERVK13-1Q9NX77 482 aa17.25■□□□□ 0.35
USP40-215ENST00000484528 DHDHQ9UQ10 334 aa17.25■□□□□ 0.35
USP40-215ENST00000484528 LEUTXA8MZ59 168 aa17.24■□□□□ 0.35
USP40-215ENST00000484528 FADS2O95864 444 aaKnown RBP17.24■□□□□ 0.35
USP40-215ENST00000484528 NFYBP25208 207 aa17.24■□□□□ 0.35
USP40-215ENST00000484528 ZNF691Q5VV52 312 aa17.24■□□□□ 0.35
USP40-215ENST00000484528 SERPINA12Q8IW75 414 aa17.24■□□□□ 0.35
USP40-215ENST00000484528 CHST4Q8NCG5 386 aa17.24■□□□□ 0.35
USP40-215ENST00000484528 OR5AU1Q8NGC0 362 aa17.24■□□□□ 0.35
USP40-215ENST00000484528 OR4D6Q8NGJ1 314 aa17.24■□□□□ 0.35
USP40-215ENST00000484528 OR5D14Q8NGL3 314 aa17.24■□□□□ 0.35
USP40-215ENST00000484528 CAPSLQ8WWF8 208 aa17.24■□□□□ 0.35
USP40-215ENST00000484528 SLC29A1Q99808 456 aa17.24■□□□□ 0.35
USP40-215ENST00000484528 ZNF649Q9BS31 505 aa17.24■□□□□ 0.35
USP40-215ENST00000484528 TMEM212A6NML5 194 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 H0YJX3 145 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 TOR1AO14656 332 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 XPNPEP2O43895 674 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 CSN2P05814 226 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 CD34P28906 385 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 BRS3P32247 399 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 GLP1RP43220 463 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 OR3A4PP47883 348 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 SOX2P48431 317 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 C17orf58Q2M2W7 97 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 HLA-DRB5Q30154 266 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 ABCA11PQ4W5N1 156 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 TPTE2P1Q5T6R2 138 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 PARP16Q8N5Y8 322 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 OR51A2Q8NGJ7 313 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 OR52I1Q8NGK6 324 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 RHOXF1Q8NHV9 184 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 LIN7BQ9HAP6 207 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 RHOFQ9HBH0 211 aa17.23■□□□□ 0.35
USP40-215ENST00000484528 H3BUI4 141 aa17.22■□□□□ 0.35
USP40-215ENST00000484528 IGHV3-7P01780 117 aa17.22■□□□□ 0.35
USP40-215ENST00000484528 LPLP06858 475 aa17.22■□□□□ 0.35
USP40-215ENST00000484528 CCDC159P0C7I6 412 aa17.22■□□□□ 0.35
USP40-215ENST00000484528 MTNR1BP49286 362 aa17.22■□□□□ 0.35
USP40-215ENST00000484528 GTF2A1P52655 376 aaPredicted RBP17.22■□□□□ 0.35
USP40-215ENST00000484528 PAN3Q58A45 887 aaKnown RBP17.22■□□□□ 0.35
USP40-215ENST00000484528 Q6ZPA2 131 aa17.22■□□□□ 0.35
USP40-215ENST00000484528 CCDC121Q6ZUS5 278 aa17.22■□□□□ 0.35
USP40-215ENST00000484528 C16orf82Q7Z2V1 217 aa17.22■□□□□ 0.35
USP40-215ENST00000484528 SATL1Q86VE3 508 aa17.22■□□□□ 0.35
USP40-215ENST00000484528 OR10K1Q8NGX5 313 aa17.22■□□□□ 0.35
USP40-215ENST00000484528 RGP1Q92546 391 aaPredicted RBP17.22■□□□□ 0.35
USP40-215ENST00000484528 AKR1E2Q96JD6 320 aa17.22■□□□□ 0.35
USP40-215ENST00000484528 Q96MT0 163 aa17.22■□□□□ 0.35
USP40-215ENST00000484528 GPER1Q99527 375 aa17.22■□□□□ 0.35
USP40-215ENST00000484528 C9orf16Q9BUW7 83 aa17.22■□□□□ 0.35
USP40-215ENST00000484528 FAM192AQ9GZU8 254 aa17.22■□□□□ 0.35
USP40-215ENST00000484528 KIF25Q9UIL4 384 aa17.22■□□□□ 0.35
USP40-215ENST00000484528 ZNF729A6NN14 1252 aaPredicted RBP17.21■□□□□ 0.35
USP40-215ENST00000484528 BUB1B-PAK6H3BSN5 160 aa17.21■□□□□ 0.35
USP40-215ENST00000484528 GABRPO00591 440 aa17.21■□□□□ 0.35
USP40-215ENST00000484528 MPZL2O60487 215 aa17.21■□□□□ 0.35
USP40-215ENST00000484528 CEACAM3P40198 252 aa17.21■□□□□ 0.35
USP40-215ENST00000484528 ARHGDIBP52566 201 aa17.21■□□□□ 0.35
USP40-215ENST00000484528 GBX2P52951 348 aaPredicted RBP17.21■□□□□ 0.35
USP40-215ENST00000484528 RAB40BQ12829 278 aa17.21■□□□□ 0.35
USP40-215ENST00000484528 CENPVQ7Z7K6 275 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms