RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 ZNF780AO75290 641 aaPredicted RBP7.34□□□□□ -1.23
COL8A1-207ENST00000483969 HAND1O96004 215 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 IGKV1D-12P01611 117 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 CSTBP04080 98 aaKnown RBP7.34□□□□□ -1.23
COL8A1-207ENST00000483969 TFF1P04155 84 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 TK1P04183 234 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 DUX4L2P0CJ85 424 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 DUX4L3P0CJ86 424 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 DUX4L4P0CJ87 422 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 DUX4L5P0CJ88 424 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 DUX4L6P0CJ89 424 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 DUX4L7P0CJ90 424 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 CPEP16870 476 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 ADRA2CP18825 462 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 MAP2K4P45985 399 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 MTNR1BP49286 362 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 ZP1P60852 638 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 COL10A1Q03692 680 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 EMX1Q04741 257 aaPredicted RBP7.34□□□□□ -1.23
COL8A1-207ENST00000483969 FHL2Q14192 279 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 GPR176Q14439 515 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 RSU1Q15404 277 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 TBCEQ15813 527 aaPredicted RBP7.34□□□□□ -1.23
COL8A1-207ENST00000483969 KRTAP21-3Q3LHN1 58 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 LIPKQ5VXJ0 399 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 ELP2Q6IA86 826 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 DUX4L9Q6RFH8 374 aaPredicted RBP7.34□□□□□ -1.23
COL8A1-207ENST00000483969 ASCL4Q6XD76 172 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 ZNF367Q7RTV3 350 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 ASCC1Q8N9N2 400 aaKnown RBP7.34□□□□□ -1.23
COL8A1-207ENST00000483969 OR51A2Q8NGJ7 313 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 C8orf46Q8TAG6 207 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 ZNF418Q8TF45 676 aaPredicted RBP7.34□□□□□ -1.23
COL8A1-207ENST00000483969 FOXRED1Q96CU9 486 aaPredicted RBP7.34□□□□□ -1.23
COL8A1-207ENST00000483969 PCGF1Q9BSM1 259 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 FAM192AQ9GZU8 254 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 MS4A7Q9GZW8 240 aaPredicted RBP7.34□□□□□ -1.23
COL8A1-207ENST00000483969 EXOSC4Q9NPD3 245 aaKnown RBP7.34□□□□□ -1.23
COL8A1-207ENST00000483969 NOX4Q9NPH5 578 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 ACOT13Q9NPJ3 140 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 RBFOX1Q9NWB1 397 aaKnown RBP7.34□□□□□ -1.23
COL8A1-207ENST00000483969 ONECUT1Q9UBC0 465 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 DUX4Q9UBX2 424 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 GSTK1Q9Y2Q3 226 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 VPS13CQ709C8 3753 aa7.34□□□□□ -1.24
COL8A1-207ENST00000483969 FUOMA2VDF0 154 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 M0R1W7 72 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 DEGS1O15121 323 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 PIN1P1O15428 100 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 TCF21O43680 179 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 FCN3O75636 299 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 ARL6IP5O75915 188 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 MAS1P04201 325 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 SFTPBP07988 381 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 CALCBP10092 127 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 SELLP14151 372 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 SRMP19623 302 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 GABRR1P24046 479 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 DUSP1P28562 367 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 RANBP1P43487 201 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 CEBPDP49716 269 aaPredicted RBP7.33□□□□□ -1.24
COL8A1-207ENST00000483969 RPL31P62899 125 aaKnown RBP7.33□□□□□ -1.24
COL8A1-207ENST00000483969 SCN1BQ07699 218 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 HSD17B12Q53GQ0 312 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 GPR157Q5UAW9 335 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 GLT8D1Q68CQ7 371 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 ASPHD2Q6ICH7 369 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 RBMS3Q6XE24 437 aaKnown RBP7.33□□□□□ -1.24
COL8A1-207ENST00000483969 GDPD3Q7L5L3 318 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 RNF144BQ7Z419 303 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 PRIMA1Q86XR5 153 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 FAM185AQ8N0U4 392 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 SPARTQ8N0X7 666 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 FGFRL1Q8N441 504 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 BPIFB2Q8N4F0 458 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 JAGN1Q8N5M9 183 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 KIR3DL3Q8N743 410 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 NKAIN3Q8N8D7 197 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 CHST4Q8NCG5 386 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 Q8NFD4 153 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 FCGR1BQ92637 280 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 TMEM203Q969S6 136 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 ORAI1Q96D31 301 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 ZNF503Q96F45 646 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 SUCNR1Q9BXA5 334 aa7.33□□□□□ -1.24
COL8A1-207ENST00000483969 FLNAP21333 2647 aaKnown RBP7.32□□□□□ -1.24
COL8A1-207ENST00000483969 TRAV8-7A0A075B6U6 113 aa7.32□□□□□ -1.24
COL8A1-207ENST00000483969 hADV38S2A0JD32 116 aa7.32□□□□□ -1.24
COL8A1-207ENST00000483969 H3BUI4 141 aa7.32□□□□□ -1.24
COL8A1-207ENST00000483969 MGST3O14880 152 aa7.32□□□□□ -1.24
COL8A1-207ENST00000483969 ZNF737O75373 536 aa7.32□□□□□ -1.24
COL8A1-207ENST00000483969 ZNF44P15621 663 aa7.32□□□□□ -1.24
COL8A1-207ENST00000483969 LMO1P25800 156 aa7.32□□□□□ -1.24
COL8A1-207ENST00000483969 PSMD7P51665 324 aa7.32□□□□□ -1.24
COL8A1-207ENST00000483969 SNU13P55769 128 aaKnown RBP7.32□□□□□ -1.24
COL8A1-207ENST00000483969 MEF2CQ06413 473 aaPredicted RBP7.32□□□□□ -1.24
COL8A1-207ENST00000483969 GRK1Q15835 563 aa7.32□□□□□ -1.24
COL8A1-207ENST00000483969 KLF17Q5JT82 389 aaPredicted RBP7.32□□□□□ -1.24
COL8A1-207ENST00000483969 TMEM200BQ69YZ2 307 aa7.32□□□□□ -1.24
COL8A1-207ENST00000483969 USP43Q70EL4 1123 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms