RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 IGHV2OR16-5A0A0B4J2B6 119 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 IGHV1-18A0A0C4DH31 117 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 A0A0G2JNJ9 132 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 TMEM82A0PJX8 343 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 MCRIP1C9JLW8 97 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 C16orf97H3BN30 126 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 H7C1Q1 480 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 J3QT63 122 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 M0QYG6 137 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 GEMIN2O14893 280 aaKnown RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 SMAD7O15105 426 aaKnown RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 ZNHIT1O43257 154 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 SSNA1O43805 119 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 RGS11O94810 467 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 DIRAS3O95661 229 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 PTBP3O95758 552 aaKnown RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 IGHV3-13P01766 116 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 CRYAAP02489 173 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 RLN1P04808 185 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 CELA3BP08861 270 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 CTXN2P0C2S0 81 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 OR4E1P0C645 316 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 ZNF250P15622 560 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 CA6P23280 308 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 GABRR1P24046 479 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 PTAFRP25105 342 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 GCH1P30793 250 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 HRH1P35367 487 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 OR3A3P47888 321 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 TAS2R31P59538 309 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 NAAAQ02083 359 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 DHODHQ02127 395 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 SRSF4Q08170 494 aaKnown RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 CBX3Q13185 183 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 RBM39Q14498 530 aaKnown RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 ZNF146Q15072 292 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 FCN2Q15485 313 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 KCNJ8Q15842 424 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 MICBQ29980 383 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 CHRFAM7AQ494W8 412 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 DMRTC1Q5HYR2 192 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 SPIN3Q5JUX0 258 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 ATPAF1Q5TC12 328 aaPredicted RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 SHEQ5VZ18 495 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 FAAP20Q6NZ36 180 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 C6orf201Q7Z4U5 140 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 PEG10Q86TG7 708 aaKnown RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 MYPOPQ86VE0 399 aaPredicted RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 LHFPL1Q86WI0 220 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 FAM58AQ8N1B3 248 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 CIARTQ8N365 385 aaPredicted RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 GVQW1Q8N7I0 195 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 ZBTB8BQ8NAP8 495 aaPredicted RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 OR11H7Q8NGC8 314 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 OR10AD1Q8NGE0 317 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 OR5H2Q8NGV7 314 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 OR10K1Q8NGX5 313 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 ZNF431Q8TF32 576 aaPredicted RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 EMG1Q92979 244 aaKnown RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 S100PBPQ96BU1 408 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 ZNF486Q96H40 463 aaPredicted RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 FYTTD1Q96QD9 318 aaKnown RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 CMSS1Q9BQ75 279 aaKnown RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 FAAP24Q9BTP7 215 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 ST6GALNAC5Q9BVH7 336 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 C19orf24Q9BVV8 132 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 ZNF436Q9C0F3 470 aaPredicted RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 FGF23Q9GZV9 251 aaPredicted RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 PPA2Q9H2U2 334 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 RANGRFQ9HD47 186 aaPredicted RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 RASL12Q9NYN1 266 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 Q9UFV3 132 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 SHPKQ9UHJ6 478 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 ANXA10Q9UJ72 324 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 PURGQ9UJV8 347 aaKnown RBP4.6□□□□□ -1.67
COL17A1-206ENST00000483876 GPR132Q9UNW8 380 aa4.6□□□□□ -1.67
COL17A1-206ENST00000483876 IGLV3-9A0A075B6K5 115 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 KIR2DS1A0A191URI9 304 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 A0A1W2PR80 420 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 FAM172BPA6NC97 362 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 MEIS3P1A6NDR6 274 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 VSTM5A8MXK1 200 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 IFNL4K9M1U5 179 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 NAPSAO96009 420 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 PMP2P02689 132 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 GIPP09681 153 aaPredicted RBP4.59□□□□□ -1.67
COL17A1-206ENST00000483876 PGA5P0DJD9 388 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 VSIG10L2P0DP72 767 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 AMY2BP19961 511 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 ANXA7P20073 488 aaKnown RBP4.59□□□□□ -1.67
COL17A1-206ENST00000483876 BCL3P20749 454 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 ZBTB25P24278 435 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 LMO1P25800 156 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 MDH2P40926 338 aaKnown RBP4.59□□□□□ -1.67
COL17A1-206ENST00000483876 CA7P43166 264 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 KIR2DS4P43632 304 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 NPBWR2P48146 333 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 CASP6P55212 293 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 UCP3P55916 312 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms