RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 FAM78BQ5VT40 261 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 SLC16A9Q7RTY1 509 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 SLC25A42Q86VD7 318 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 UEVLDQ8IX04 471 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 IL22RA1Q8N6P7 574 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 PNPLA1Q8N8W4 532 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 OR4N2Q8NGD1 307 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 OR6T1Q8NGN1 323 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 OR10G4Q8NGN3 311 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 OR6N2Q8NGY6 317 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 SYNPRQ8TBG9 265 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 PTPMT1Q8WUK0 201 aaPredicted RBP3.62□□□□□ -1.83
CD55-208ENST00000476590 UBTD2Q8WUN7 234 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 AQP3Q92482 292 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 DAZLQ92904 295 aaKnown RBP3.62□□□□□ -1.83
CD55-208ENST00000476590 RAB8BQ92930 207 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 NEIL2Q969S2 332 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 TRIB3Q96RU7 358 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 SLC25A51Q9H1U9 297 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 PARLQ9H300 379 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 MED20Q9H944 212 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 ZNF160Q9HCG1 818 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 Q9N2K0 584 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 ONECUT1Q9UBC0 465 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 BOKQ9UMX3 212 aaPredicted RBP3.62□□□□□ -1.83
CD55-208ENST00000476590 LAMP3Q9UQV4 416 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 ETV7Q9Y603 341 aa3.62□□□□□ -1.83
CD55-208ENST00000476590 SIRT4Q9Y6E7 314 aaPredicted RBP3.62□□□□□ -1.83
CD55-208ENST00000476590 ANKRD36A6QL64 1941 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 MYLKQ15746 1914 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 SNED1Q8TER0 1413 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 MYO10Q9HD67 2058 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 LOC102723996A0A087X1L8 192 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 TRAV38-1A0A0B4J264 116 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 TRBV4-1A0A0J9YWV2 114 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 A0A0J9YY10 115 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 C13orf42A0A1B0GVH6 325 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 A0A1B0GX78 115 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 A0A1W2PQM1 296 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 A0A1W2PRX2 142 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 WIPF3A6NGB9 483 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 A8MZ25 164 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 DIRC3C9JPN6 131 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 HS3ST1O14792 307 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 BNIP3LO60238 219 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 GCM2O75603 506 aaPredicted RBP3.61□□□□□ -1.83
CD55-208ENST00000476590 HBZP02008 142 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 PRH1P02810 166 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 TYMSP04818 313 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 CFIP05156 583 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 PFN1P07737 140 aaKnown RBP3.61□□□□□ -1.83
CD55-208ENST00000476590 ADH5P11766 374 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 AQP1P29972 269 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 PYCR1P32322 319 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 NPBWR2P48146 333 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 DNASE1L1P49184 302 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 GNG4P50150 75 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 GPM6AP51674 278 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 SMIM11AP58511 58 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 GNG3P63215 75 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 ZXDBP98169 803 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 B4GALNT1Q00973 533 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 CPSF6Q16630 551 aaKnown RBP eCLIP3.61□□□□□ -1.83
CD55-208ENST00000476590 ZNF766Q5HY98 468 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 CPTPQ5TA50 214 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 FCRL6Q6DN72 434 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 PWWP2BQ6NUJ5 590 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 ZNF880Q6PDB4 577 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 ASCL4Q6XD76 172 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 ZNF621Q6ZSS3 439 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 DPY19L4Q7Z388 723 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 ERASQ7Z444 233 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 CPEB2Q7Z5Q1 589 aaKnown RBP3.61□□□□□ -1.83
CD55-208ENST00000476590 MRGPREQ86SM8 312 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.61□□□□□ -1.83
CD55-208ENST00000476590 FAM219AQ8IW50 185 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 LINC00471Q8N535 108 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 OR5AU1Q8NGC0 362 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 OR4D11Q8NGI4 311 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 CYB5D2Q8WUJ1 264 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 SKA2Q8WVK7 121 aaPredicted RBP3.61□□□□□ -1.83
CD55-208ENST00000476590 SUSD6Q92537 303 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 ST6GALNAC6Q969X2 333 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 RNF183Q96D59 192 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 BTF3L4Q96K17 158 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 LRRC3BQ96PB8 259 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 OR5B12Q96R08 314 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 RASL10BQ96S79 203 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 MYADMQ96S97 322 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 RARRES2Q99969 163 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 GREM2Q9H772 168 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 ISG20L2Q9H9L3 353 aaKnown RBP3.61□□□□□ -1.83
CD55-208ENST00000476590 KIAA1456Q9P272 454 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 THAP10Q9P2Z0 257 aaPredicted RBP3.61□□□□□ -1.83
CD55-208ENST00000476590 ERRFI1Q9UJM3 462 aaPredicted RBP3.61□□□□□ -1.83
CD55-208ENST00000476590 GPR132Q9UNW8 380 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 WSB1Q9Y6I7 421 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 MCM3APO60318 1980 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 ZNF106Q9H2Y7 1883 aaKnown RBP3.61□□□□□ -1.83
CD55-208ENST00000476590 BORCS7-ASMTA0A0B4J1R7 106 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms