RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 C1orf122Q6ZSJ8 110 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.2□□□□□ -0.94
ABCF1-205ENST00000475993 OR2C3Q8N628 320 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 C20orf144Q9BQM9 153 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 NAA60Q9H7X0 242 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 GPR35Q9HC97 309 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 SLC2A9Q9NRM0 540 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 PHPT1Q9NRX4 125 aaPredicted RBP9.2□□□□□ -0.94
ABCF1-205ENST00000475993 RNF115Q9Y4L5 304 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 DOCK8Q8NF50 2099 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 TRAV1-1A0A0B4J248 108 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 IGHV2-70DA0A0C4DH43 119 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 SERPINE3A8MV23 424 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 HIDE1A8MVS5 230 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 TGFBR3LH3BV60 316 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 GNMTQ14749 295 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 PDGFRLQ15198 375 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 SHHQ15465 462 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 TMEM241Q24JQ0 296 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 DPPA3Q6W0C5 159 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 MYPOPQ86VE0 399 aaPredicted RBP9.2□□□□□ -0.94
ABCF1-205ENST00000475993 OR4D5Q8NGN0 318 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 C16orf52Q8NHV5 167 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 LOXL4Q96JB6 756 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 ZFYVE21Q9BQ24 234 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 PECRQ9BY49 303 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 CENPMQ9NSP4 180 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 HSPB7Q9UBY9 170 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 SLC17A4Q9Y2C5 497 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 HCFC2Q9Y5Z7 792 aa9.2□□□□□ -0.94
ABCF1-205ENST00000475993 MUC22E2RYF6 1773 aaPredicted RBP9.19□□□□□ -0.94
ABCF1-205ENST00000475993 IGSF23A1L1A6 192 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 FAM221AA4D161 298 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 FAM24AA6NFZ4 105 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 ZNF878C9JN71 531 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 CCL16O15467 120 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 DXOO77932 396 aaKnown RBP9.19□□□□□ -0.94
ABCF1-205ENST00000475993 TOMM40O96008 361 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 CD55P08174 381 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 ARR3P36575 388 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 COMPP49747 757 aaPredicted RBP9.19□□□□□ -0.94
ABCF1-205ENST00000475993 ENDOGQ14249 297 aaKnown RBP9.19□□□□□ -0.94
ABCF1-205ENST00000475993 KIR2DS3Q14952 304 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 LIAT1Q6ZQX7 453 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 IL22RA2Q969J5 263 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 PINX1Q96BK5 328 aaKnown RBP9.19□□□□□ -0.94
ABCF1-205ENST00000475993 GNPNAT1Q96EK6 184 aaPredicted RBP9.19□□□□□ -0.94
ABCF1-205ENST00000475993 MTIF3Q9H2K0 278 aaKnown RBP9.19□□□□□ -0.94
ABCF1-205ENST00000475993 CISD1Q9NZ45 108 aaKnown RBP9.19□□□□□ -0.94
ABCF1-205ENST00000475993 LAMA3Q16787 3333 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 MT-ATP6P00846 226 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 ZNF20P17024 532 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 TCEAL5Q5H9L2 206 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 ERASQ7Z444 233 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 OR51T1Q8NGJ9 327 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 SSC4DQ8WTU2 575 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 FAM216AQ8WUB2 273 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 RERGQ96A58 199 aaPredicted RBP9.19□□□□□ -0.94
ABCF1-205ENST00000475993 MSI2Q96DH6 328 aaKnown RBP9.19□□□□□ -0.94
ABCF1-205ENST00000475993 MS4A10Q96PG2 267 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 LIME1Q9H400 295 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 COX11Q9Y6N1 276 aa9.19□□□□□ -0.94
ABCF1-205ENST00000475993 TRAV39A0A0B4J263 110 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 BLACEA4D250 179 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 EML2O95834 649 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 STAG3L3P0CL85 134 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 BLVRBP30043 206 aaPredicted RBP9.18□□□□□ -0.94
ABCF1-205ENST00000475993 GNB2P62879 340 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 SCGB2A2Q13296 93 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 VAMP3Q15836 100 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 TPTE2P1Q5T6R2 138 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 ZNF468Q5VIY5 522 aaPredicted RBP9.18□□□□□ -0.94
ABCF1-205ENST00000475993 OR2D3Q8NGH3 330 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 OR2V1Q8NHB1 315 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 RTN4IP1Q8WWV3 396 aaPredicted RBP9.18□□□□□ -0.94
ABCF1-205ENST00000475993 OR6C1Q96RD1 312 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 MEGF9Q9H1U4 602 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 ZNF319Q9P2F9 582 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 LAMP3Q9UQV4 416 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 ADH5P11766 374 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 FAM3BP58499 235 aaPredicted RBP9.18□□□□□ -0.94
ABCF1-205ENST00000475993 SMIM21Q3B7S5 101 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 WDR25Q64LD2 544 aaPredicted RBP9.18□□□□□ -0.94
ABCF1-205ENST00000475993 LILRA6Q6PI73 481 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.18□□□□□ -0.94
ABCF1-205ENST00000475993 MCEMP1Q8IX19 187 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 TMEM123Q8N131 208 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 OR51G1Q8NGK1 321 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 FAM3CQ92520 227 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 RBKSQ9H477 322 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 SOHLH2Q9NX45 425 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 GNG13Q9P2W3 67 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 THAP10Q9P2Z0 257 aaPredicted RBP9.18□□□□□ -0.94
ABCF1-205ENST00000475993 BCL2P10415 239 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 MMP9P14780 707 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 DRD3P35462 400 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 TRIM61Q5EBN2 209 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 ACTL10Q5JWF8 245 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 PRR27Q6MZM9 219 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 H1FOOQ8IZA3 346 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms