RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 LINC01560Q8TB33 94 aa7.92□□□□□ -1.14
VPS52-216ENST00000471309 NEK7Q8TDX7 302 aa7.92□□□□□ -1.14
VPS52-216ENST00000471309 CCDC107Q8WV48 283 aa7.92□□□□□ -1.14
VPS52-216ENST00000471309 MAFIPQ8WZ33 124 aa7.92□□□□□ -1.14
VPS52-216ENST00000471309 HPS1Q92902 700 aa7.92□□□□□ -1.14
VPS52-216ENST00000471309 ERGIC1Q969X5 290 aa7.92□□□□□ -1.14
VPS52-216ENST00000471309 MRGPRFQ96AM1 343 aa7.92□□□□□ -1.14
VPS52-216ENST00000471309 ALX4Q9H161 411 aaPredicted RBP7.92□□□□□ -1.14
VPS52-216ENST00000471309 PPA2Q9H2U2 334 aa7.92□□□□□ -1.14
VPS52-216ENST00000471309 SEBOXQ9HB31 216 aaPredicted RBP7.92□□□□□ -1.14
VPS52-216ENST00000471309 GPN1Q9HCN4 374 aaPredicted RBP7.92□□□□□ -1.14
VPS52-216ENST00000471309 UFSP2Q9NUQ7 469 aa7.92□□□□□ -1.14
VPS52-216ENST00000471309 ETAA1Q9NY74 926 aa7.92□□□□□ -1.14
VPS52-216ENST00000471309 GLS2Q9UI32 602 aa7.92□□□□□ -1.14
VPS52-216ENST00000471309 FLNBO75369 2602 aaKnown RBP7.92□□□□□ -1.14
VPS52-216ENST00000471309 IGKV1D-8A0A087WSZ0 117 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 KIR2DS1A0A191URI9 304 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 FAM221AA4D161 298 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 OR2AT4A6NND4 320 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 C17orf100A8MU93 164 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 SNRPGP15A8MWD9 76 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 E7EQL1 145 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 H7C1Q1 480 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 M0R233 179 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 SIRPB1O00241 398 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 SLC33A1O00400 549 aaPredicted RBP7.91□□□□□ -1.14
VPS52-216ENST00000471309 SH2D1BO14796 132 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 WNT9BO14905 357 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 CCNKO75909 580 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 HAND1O96004 215 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 RLN1P04808 185 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 ANXA7P20073 488 aaKnown RBP7.91□□□□□ -1.14
VPS52-216ENST00000471309 FPR2P25090 351 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 LMO1P25800 156 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 SERPINF1P36955 418 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 ECI1P42126 302 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 KIR2DS4P43632 304 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 CBX3Q13185 183 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 KIR2DS1Q14954 304 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 TESK1Q15569 626 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 GRK1Q15835 563 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 C11orf91Q3C1V1 193 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 PAN3Q58A45 887 aaKnown RBP7.91□□□□□ -1.14
VPS52-216ENST00000471309 ATPAF1Q5TC12 328 aaPredicted RBP7.91□□□□□ -1.14
VPS52-216ENST00000471309 CD276Q5ZPR3 534 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 ZNF626Q68DY1 528 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 MOB1BQ7L9L4 216 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 SLC36A1Q7Z2H8 476 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 PEG10Q86TG7 708 aaKnown RBP7.91□□□□□ -1.14
VPS52-216ENST00000471309 MOGAT3Q86VF5 341 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 OR6F1Q8NGZ6 308 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 TERB2Q8NHR7 220 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 Q8TCH9 128 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 ITLN1Q8WWA0 313 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 ITLN2Q8WWU7 325 aaPredicted RBP7.91□□□□□ -1.14
VPS52-216ENST00000471309 RDH5Q92781 318 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 TMEM204Q9BSN7 226 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 OR51J1Q9H342 316 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 CHMP1AQ9HD42 196 aaPredicted RBP7.91□□□□□ -1.14
VPS52-216ENST00000471309 Q9N2K0 584 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 NECAP2Q9NVZ3 263 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 EHFQ9NZC4 300 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 NPTNQ9Y639 398 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 POLEQ07864 2286 aa7.91□□□□□ -1.14
VPS52-216ENST00000471309 ITPR1Q14643 2758 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 HCFC1P51610 2035 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 CHD3Q12873 2000 aaKnown RBP7.9□□□□□ -1.14
VPS52-216ENST00000471309 DEFB108AA8MXU0 73 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 C3orf80F5H4A9 247 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 BOLA2-SMG1P6H3BVE0 249 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.9□□□□□ -1.14
VPS52-216ENST00000471309 IFNL4K9M1U5 179 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 HSPB6O14558 160 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 HS3ST1O14792 307 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 SIAH2O43255 324 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 CREBL2O60519 120 aaPredicted RBP7.9□□□□□ -1.14
VPS52-216ENST00000471309 ZG16O60844 167 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 LHBP01229 141 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 VSIG10L2P0DP72 767 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 EGR1P18146 543 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 TNFRSF1AP19438 455 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 LOXP28300 417 aaPredicted RBP7.9□□□□□ -1.14
VPS52-216ENST00000471309 APOBEC3AP31941 199 aaPredicted RBP7.9□□□□□ -1.14
VPS52-216ENST00000471309 KCNJ3P48549 501 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 GMFBP60983 142 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 TSPAN5P62079 268 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 CD300CQ08708 224 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 SNTB1Q13884 538 aaKnown RBP7.9□□□□□ -1.14
VPS52-216ENST00000471309 SURF2Q15527 256 aaPredicted RBP7.9□□□□□ -1.14
VPS52-216ENST00000471309 SPRNQ5BIV9 151 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 FAM209AQ5JX71 171 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 AADACL3Q5VUY0 350 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 FAHD2BQ6P2I3 314 aaPredicted RBP7.9□□□□□ -1.14
VPS52-216ENST00000471309 ZNF880Q6PDB4 577 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 GCSAMQ8N6F7 178 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 OR11L1Q8NGX0 322 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 MRPL30Q8TCC3 161 aaKnown RBP7.9□□□□□ -1.14
VPS52-216ENST00000471309 DACT3Q96B18 629 aaPredicted RBP7.9□□□□□ -1.14
VPS52-216ENST00000471309 FAHD2AQ96GK7 314 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 ST6GAL2Q96JF0 529 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms