RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 XPNPEP2O43895 674 aa19.56■□□□□ 0.72
PTCH1-210ENST00000468211 CD34P28906 385 aa19.56■□□□□ 0.72
PTCH1-210ENST00000468211 ALDH3A2P51648 485 aa19.56■□□□□ 0.72
PTCH1-210ENST00000468211 ZP1P60852 638 aa19.56■□□□□ 0.72
PTCH1-210ENST00000468211 CD83Q01151 205 aa19.56■□□□□ 0.72
PTCH1-210ENST00000468211 IL18R1Q13478 541 aa19.56■□□□□ 0.72
PTCH1-210ENST00000468211 TCTEX1D4Q5JR98 221 aa19.56■□□□□ 0.72
PTCH1-210ENST00000468211 OR52W1Q6IF63 320 aa19.56■□□□□ 0.72
PTCH1-210ENST00000468211 RTN4RL2Q86UN3 420 aa19.56■□□□□ 0.72
PTCH1-210ENST00000468211 SAXO1Q8IYX7 474 aa19.56■□□□□ 0.72
PTCH1-210ENST00000468211 ALG8Q9BVK2 526 aa19.56■□□□□ 0.72
PTCH1-210ENST00000468211 SH2D7A6NKC9 451 aaPredicted RBP19.55■□□□□ 0.72
PTCH1-210ENST00000468211 CSN2P05814 226 aa19.55■□□□□ 0.72
PTCH1-210ENST00000468211 DBTP11182 482 aaKnown RBP19.55■□□□□ 0.72
PTCH1-210ENST00000468211 GALEQ14376 348 aa19.55■□□□□ 0.72
PTCH1-210ENST00000468211 KPNB1Q14974 876 aaKnown RBP19.55■□□□□ 0.72
PTCH1-210ENST00000468211 ATXN7L3Q14CW9 347 aaPredicted RBP19.55■□□□□ 0.72
PTCH1-210ENST00000468211 C17orf58Q2M2W7 97 aa19.55■□□□□ 0.72
PTCH1-210ENST00000468211 KRBOX4Q5JUW0 171 aa19.55■□□□□ 0.72
PTCH1-210ENST00000468211 CBR4Q8N4T8 237 aa19.55■□□□□ 0.72
PTCH1-210ENST00000468211 ZNF596Q8TC21 504 aa19.55■□□□□ 0.72
PTCH1-210ENST00000468211 LIN7BQ9HAP6 207 aa19.55■□□□□ 0.72
PTCH1-210ENST00000468211 AMBNQ9NP70 447 aa19.55■□□□□ 0.72
PTCH1-210ENST00000468211 FUOMA2VDF0 154 aa19.54■□□□□ 0.72
PTCH1-210ENST00000468211 LEUTXA8MZ59 168 aa19.54■□□□□ 0.72
PTCH1-210ENST00000468211 LY6LH3BQJ8 138 aa19.54■□□□□ 0.72
PTCH1-210ENST00000468211 ZFPL1O95159 310 aa19.54■□□□□ 0.72
PTCH1-210ENST00000468211 AMY1AP04745 511 aa19.54■□□□□ 0.72
PTCH1-210ENST00000468211 AMY2AP04746 511 aa19.54■□□□□ 0.72
PTCH1-210ENST00000468211 TMEM225BP0DP42 221 aa19.54■□□□□ 0.72
PTCH1-210ENST00000468211 KISS1Q15726 138 aa19.54■□□□□ 0.72
PTCH1-210ENST00000468211 STMN2Q93045 179 aa19.54■□□□□ 0.72
PTCH1-210ENST00000468211 PHF21AQ96BD5 680 aa19.54■□□□□ 0.72
PTCH1-210ENST00000468211 SLC25A33Q9BSK2 321 aa19.54■□□□□ 0.72
PTCH1-210ENST00000468211 PCDHGB5Q9Y5G0 923 aa19.54■□□□□ 0.72
PTCH1-210ENST00000468211 BUB1B-PAK6H3BSN5 160 aa19.53■□□□□ 0.72
PTCH1-210ENST00000468211 DEGS1O15121 323 aa19.53■□□□□ 0.72
PTCH1-210ENST00000468211 ALDOBP05062 364 aa19.53■□□□□ 0.72
PTCH1-210ENST00000468211 LPLP06858 475 aa19.53■□□□□ 0.72
PTCH1-210ENST00000468211 HCKP08631 526 aa19.53■□□□□ 0.72
PTCH1-210ENST00000468211 BRS3P32247 399 aa19.53■□□□□ 0.72
PTCH1-210ENST00000468211 PTGFRP43088 359 aa19.53■□□□□ 0.72
PTCH1-210ENST00000468211 HLA-DRB5Q30154 266 aa19.53■□□□□ 0.72
PTCH1-210ENST00000468211 ABCA11PQ4W5N1 156 aa19.53■□□□□ 0.72
PTCH1-210ENST00000468211 TPTE2P1Q5T6R2 138 aa19.53■□□□□ 0.72
PTCH1-210ENST00000468211 C10orf99Q6UWK7 81 aa19.53■□□□□ 0.72
PTCH1-210ENST00000468211 C16orf82Q7Z2V1 217 aa19.53■□□□□ 0.72
PTCH1-210ENST00000468211 PDCD1LG2Q9BQ51 273 aa19.53■□□□□ 0.72
PTCH1-210ENST00000468211 RHOFQ9HBH0 211 aa19.53■□□□□ 0.72
PTCH1-210ENST00000468211 GMPPBQ9Y5P6 360 aa19.53■□□□□ 0.72
PTCH1-210ENST00000468211 A0A087X0M5 115 aa19.52■□□□□ 0.72
PTCH1-210ENST00000468211 A0A1B0GX30 115 aa19.52■□□□□ 0.72
PTCH1-210ENST00000468211 HSPB6O14558 160 aa19.52■□□□□ 0.72
PTCH1-210ENST00000468211 SULT1B1O43704 296 aa19.52■□□□□ 0.72
PTCH1-210ENST00000468211 CGB3P0DN86 165 aa19.52■□□□□ 0.72
PTCH1-210ENST00000468211 CGB7P0DN87 165 aa19.52■□□□□ 0.72
PTCH1-210ENST00000468211 LPCAT4Q643R3 524 aa19.52■□□□□ 0.72
PTCH1-210ENST00000468211 REC114Q7Z4M0 266 aa19.52■□□□□ 0.72
PTCH1-210ENST00000468211 SYS1Q8N2H4 156 aa19.52■□□□□ 0.72
PTCH1-210ENST00000468211 PARP16Q8N5Y8 322 aa19.52■□□□□ 0.72
PTCH1-210ENST00000468211 CHST4Q8NCG5 386 aa19.52■□□□□ 0.72
PTCH1-210ENST00000468211 OR4D6Q8NGJ1 314 aa19.52■□□□□ 0.72
PTCH1-210ENST00000468211 RBM14Q96PK6 669 aaKnown RBP19.52■□□□□ 0.72
PTCH1-210ENST00000468211 AURKAIP1Q9NWT8 199 aaPredicted RBP19.52■□□□□ 0.72
PTCH1-210ENST00000468211 ERVK13-1Q9NX77 482 aa19.52■□□□□ 0.72
PTCH1-210ENST00000468211 PIN1P1O15428 100 aa19.51■□□□□ 0.71
PTCH1-210ENST00000468211 OR2F2O95006 317 aa19.51■□□□□ 0.71
PTCH1-210ENST00000468211 ALX3O95076 343 aa19.51■□□□□ 0.71
PTCH1-210ENST00000468211 OR3A4PP47883 348 aa19.51■□□□□ 0.71
PTCH1-210ENST00000468211 ZNF691Q5VV52 312 aa19.51■□□□□ 0.71
PTCH1-210ENST00000468211 CCDC121Q6ZUS5 278 aa19.51■□□□□ 0.71
PTCH1-210ENST00000468211 CENPVQ7Z7K6 275 aaPredicted RBP19.51■□□□□ 0.71
PTCH1-210ENST00000468211 SERPINA12Q8IW75 414 aa19.51■□□□□ 0.71
PTCH1-210ENST00000468211 OR51A2Q8NGJ7 313 aa19.51■□□□□ 0.71
PTCH1-210ENST00000468211 OR5D14Q8NGL3 314 aa19.51■□□□□ 0.71
PTCH1-210ENST00000468211 RHOXF1Q8NHV9 184 aa19.51■□□□□ 0.71
PTCH1-210ENST00000468211 MRAPQ8TCY5 172 aa19.51■□□□□ 0.71
PTCH1-210ENST00000468211 SGCDQ92629 289 aa19.51■□□□□ 0.71
PTCH1-210ENST00000468211 KIRREL1Q96J84 757 aa19.51■□□□□ 0.71
PTCH1-210ENST00000468211 NR1H4Q96RI1 486 aaPredicted RBP19.51■□□□□ 0.71
PTCH1-210ENST00000468211 SLC29A1Q99808 456 aa19.51■□□□□ 0.71
PTCH1-210ENST00000468211 NECAP2Q9NVZ3 263 aa19.51■□□□□ 0.71
PTCH1-210ENST00000468211 TRAV24A0A0B4J272 114 aa19.5■□□□□ 0.71
PTCH1-210ENST00000468211 SNTNA6NMZ2 147 aa19.5■□□□□ 0.71
PTCH1-210ENST00000468211 ZNF729A6NN14 1252 aaPredicted RBP19.5■□□□□ 0.71
PTCH1-210ENST00000468211 H0YJX3 145 aa19.5■□□□□ 0.71
PTCH1-210ENST00000468211 H3BUI4 141 aa19.5■□□□□ 0.71
PTCH1-210ENST00000468211 TOR1AO14656 332 aa19.5■□□□□ 0.71
PTCH1-210ENST00000468211 IGLL1P15814 213 aa19.5■□□□□ 0.71
PTCH1-210ENST00000468211 NFYBP25208 207 aa19.5■□□□□ 0.71
PTCH1-210ENST00000468211 RBM39Q14498 530 aaKnown RBP19.5■□□□□ 0.71
PTCH1-210ENST00000468211 ZSCAN26Q16670 478 aa19.5■□□□□ 0.71
PTCH1-210ENST00000468211 WFDC9Q8NEX5 89 aa19.5■□□□□ 0.71
PTCH1-210ENST00000468211 OR51T1Q8NGJ9 327 aa19.5■□□□□ 0.71
PTCH1-210ENST00000468211 OR13A1Q8NGR1 328 aa19.5■□□□□ 0.71
PTCH1-210ENST00000468211 OR5AK2Q8NH90 309 aa19.5■□□□□ 0.71
PTCH1-210ENST00000468211 RGP1Q92546 391 aaPredicted RBP19.5■□□□□ 0.71
PTCH1-210ENST00000468211 AKR1E2Q96JD6 320 aa19.5■□□□□ 0.71
PTCH1-210ENST00000468211 KIF25Q9UIL4 384 aa19.5■□□□□ 0.71
PTCH1-210ENST00000468211 KBTBD11-OT1A0A1B0GTJ5 212 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms