RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 MIDNQ504T8 468 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 ATPAF1Q5TC12 328 aaPredicted RBP3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 OR2G6Q5TZ20 316 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 HCP5Q6MZN7 132 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 ACP7Q6ZNF0 438 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 ANKRD13BQ86YJ7 626 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 PNKDQ8N490 385 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 ACBD7Q8N6N7 88 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNF485Q8NCK3 441 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 LY6G5BQ8NDX9 201 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 OR13C5Q8NGS8 318 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 OR10Z1Q8NGY1 313 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 NANPQ8TBE9 248 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 C17orf50Q8WW18 174 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 SLAMF9Q96A28 289 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 RFT1Q96AA3 541 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 UPRTQ96BW1 309 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 FGGYQ96C11 551 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 PCGF1Q9BSM1 259 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 CHST5Q9GZS9 411 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 MOB1AQ9H8S9 216 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 HES4Q9HCC6 221 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 FGF20Q9NP95 211 aaPredicted RBP3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 C8orf4Q9NR00 106 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 C19orf12Q9NSK7 152 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 NLKQ9UBE8 527 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 OR5V1Q9UGF6 321 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 RPUSD1Q9UJJ7 312 aaKnown RBP3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 NOP16Q9Y3C1 178 aaKnown RBP3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 A0A1B0GVI7 797 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 A0A1W2PRD5 423 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 A0A1W2PRF3 423 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 A0A1W2PRM7 423 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 MAGEA13PA6NCF6 341 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 OR5B21A6NL26 309 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 RFPL4AA6NLU0 287 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 DHRS7CA6NNS2 312 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNF879B4DU55 563 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 RFPL4AL1F8VTS6 287 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 RNASEK-C17orf49H0YIS7 233 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 J3QT63 122 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 SIGLEC5O15389 551 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 NOS1APO75052 506 aaPredicted RBP3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 MTRF1O75570 445 aaKnown RBP3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 TOMM40O96008 361 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 ISG15P05161 165 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 UBCP0CG48 685 aaKnown RBP3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 PPIAL4GP0DN37 164 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 PSG1P11464 419 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 BCL3P20749 454 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 PCMT1P22061 227 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 DUSP1P28562 367 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 C21orf33P30042 268 aaPredicted RBP3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 GABRA2P47869 451 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 THBS3P49746 956 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 CCR9P51686 369 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 AQP4P55087 323 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 UBA52P62987 128 aaKnown RBP3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 MZT1Q08AG7 82 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 RAB40BQ12829 278 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 DEFB112Q30KQ8 113 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 ARMCX4Q5H9R4 360 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 UTF1Q5T230 341 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 C9orf47Q6ZRZ4 202 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 FAM220AQ7Z4H9 259 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 VMO1Q7Z5L0 202 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 FTMTQ8N4E7 242 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 DHRSXQ8N5I4 330 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 C11orf42Q8N5U0 333 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 C11orf44Q8N8P7 122 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 ZFP41Q8N8Y5 198 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 POC1AQ8NBT0 407 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNF555Q8NEP9 628 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 OR4M1Q8NGD0 313 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 OR52N4Q8NGI2 321 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 OR51A2Q8NGJ7 313 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 OR13C9Q8NGT0 318 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 RPS4Y2Q8TD47 263 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 WIPF2Q8TF74 440 aaPredicted RBP3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 TMEM158Q8WZ71 300 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 H1FXQ92522 213 aaKnown RBP3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 TNFRSF14Q92956 283 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 TMIGD2Q96BF3 282 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 C12orf43Q96C57 262 aaKnown RBP3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 SDSLQ96GA7 329 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 RDH12Q96NR8 316 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 WDFY2Q96P53 400 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 HIST1H2AAQ96QV6 131 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 NRIP2Q9BQI9 281 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 DCTN5Q9BTE1 182 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 VCX3BQ9H321 246 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 SIRT7Q9NRC8 400 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 RBFOX1Q9NWB1 397 aaKnown RBP3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 PAK1IP1Q9NWT1 392 aaPredicted RBP3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNF581Q9P0T4 197 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 SLC25A10Q9UBX3 287 aaPredicted RBP3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 OR14J1Q9UGF5 321 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 NUP50Q9UKX7 468 aa3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 RPL36Q9Y3U8 105 aaKnown RBP3.91□□□□□ -1.78
EXOSC3-204ENST00000465860 TRBV2A0A0J9YWF9 115 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms