RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 ERGIC1Q969X5 290 aa16.02■□□□□ 0.16
CCDC78-206ENST00000463539 SLC2A8Q9NY64 477 aa16.02■□□□□ 0.16
CCDC78-206ENST00000463539 ETAA1Q9NY74 926 aa16.02■□□□□ 0.16
CCDC78-206ENST00000463539 ZNF462Q96JM2 2506 aa16.02■□□□□ 0.15
CCDC78-206ENST00000463539 SLC33A1O00400 549 aaPredicted RBP16.01■□□□□ 0.15
CCDC78-206ENST00000463539 C1QL1O75973 258 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 TNFRSF1AP19438 455 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 OR3A3P47888 321 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 RAG2P55895 527 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 ARPC4P59998 168 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 CCL8P80075 99 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 TESK1Q15569 626 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 CARTPTQ16568 116 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 FAM209AQ5JX71 171 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 OR5AP2Q8NGF4 316 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 ANXA10Q9UJ72 324 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 FLVCR2Q9UPI3 526 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 ROS1P08922 2347 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 IGKV1D-8A0A087WSZ0 117 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 ARPC1BO15143 372 aaKnown RBP16.01■□□□□ 0.15
CCDC78-206ENST00000463539 EGR1P18146 543 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 AGAP6Q5VW22 663 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 ZCCHC24Q8N2G6 241 aaKnown RBP16.01■□□□□ 0.15
CCDC78-206ENST00000463539 ARRDC1Q8N5I2 433 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 GCSAMQ8N6F7 178 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 BOLLQ8N9W6 283 aaKnown RBP16.01■□□□□ 0.15
CCDC78-206ENST00000463539 EGLN1Q9GZT9 426 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 MS4A5Q9H3V2 200 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 ZNF286AQ9HBT8 521 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 PPP1R3CQ9UQK1 317 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 NPTNQ9Y639 398 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 ALG5Q9Y673 324 aa16.01■□□□□ 0.15
CCDC78-206ENST00000463539 PEX14O75381 377 aa16■□□□□ 0.15
CCDC78-206ENST00000463539 NAPSAO96009 420 aa16■□□□□ 0.15
CCDC78-206ENST00000463539 RBMXP38159 391 aaKnown RBP16■□□□□ 0.15
CCDC78-206ENST00000463539 CEBPDP49716 269 aaPredicted RBP16■□□□□ 0.15
CCDC78-206ENST00000463539 MST1LQ2TV78 715 aa16■□□□□ 0.15
CCDC78-206ENST00000463539 FAM90A1Q86YD7 464 aa16■□□□□ 0.15
CCDC78-206ENST00000463539 MUC15Q8N387 334 aa16■□□□□ 0.15
CCDC78-206ENST00000463539 OR11L1Q8NGX0 322 aa16■□□□□ 0.15
CCDC78-206ENST00000463539 Q8TCH9 128 aa16■□□□□ 0.15
CCDC78-206ENST00000463539 SLC25A21Q9BQT8 299 aaPredicted RBP16■□□□□ 0.15
CCDC78-206ENST00000463539 RIMS4Q9H426 269 aaPredicted RBP16■□□□□ 0.15
CCDC78-206ENST00000463539 SAP30LQ9HAJ7 183 aa16■□□□□ 0.15
CCDC78-206ENST00000463539 DECR2Q9NUI1 292 aa16■□□□□ 0.15
CCDC78-206ENST00000463539 RNF7Q9UBF6 113 aa16■□□□□ 0.15
CCDC78-206ENST00000463539 DNAJB11Q9UBS4 358 aa16■□□□□ 0.15
CCDC78-206ENST00000463539 SPTBN1Q01082 2364 aaKnown RBP16■□□□□ 0.15
CCDC78-206ENST00000463539 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.99■□□□□ 0.15
CCDC78-206ENST00000463539 MDH2P40926 338 aaKnown RBP15.99■□□□□ 0.15
CCDC78-206ENST00000463539 FAM222BQ8WU58 562 aa15.99■□□□□ 0.15
CCDC78-206ENST00000463539 PPA2Q9H2U2 334 aa15.99■□□□□ 0.15
CCDC78-206ENST00000463539 EHFQ9NZC4 300 aa15.99■□□□□ 0.15
CCDC78-206ENST00000463539 RFPL4AA6NLU0 287 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 RFPL4AL1F8VTS6 287 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 PYCARD-AS1I3L0S3 204 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 C19orf84I3L1E1 186 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 LHBP01229 141 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 IRF2P14316 349 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 TSPAN5P62079 268 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 SNRPD2P62316 118 aaKnown RBP15.98■□□□□ 0.15
CCDC78-206ENST00000463539 SHEQ5VZ18 495 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 Q6ZPA2 131 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 OVCH2Q7RTZ1 564 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 WIPI2Q9Y4P8 454 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 MYO18BQ8IUG5 2567 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 IFNL4K9M1U5 179 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 SDCBPO00560 298 aaPredicted RBP15.98■□□□□ 0.15
CCDC78-206ENST00000463539 RLN1P04808 185 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 LMO1P25800 156 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 CDK10Q15131 360 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 TMEM17Q86X19 198 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 OR13C8Q8NGS7 320 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 MRPL30Q8TCC3 161 aaKnown RBP15.98■□□□□ 0.15
CCDC78-206ENST00000463539 GIMAP1Q8WWP7 306 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 HPS1Q92902 700 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 BEX2Q9BXY8 128 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 BEX1Q9HBH7 125 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 TMEM165Q9HC07 324 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 TREM2Q9NZC2 230 aa15.98■□□□□ 0.15
CCDC78-206ENST00000463539 LRRC30A6NM36 301 aa15.97■□□□□ 0.15
CCDC78-206ENST00000463539 H7C1Q1 480 aa15.97■□□□□ 0.15
CCDC78-206ENST00000463539 ATXN7L3Q14CW9 347 aaPredicted RBP15.97■□□□□ 0.15
CCDC78-206ENST00000463539 SRSF7Q16629 238 aaKnown RBP eCLIP15.97■□□□□ 0.15
CCDC78-206ENST00000463539 SWI5Q1ZZU3 235 aa15.97■□□□□ 0.15
CCDC78-206ENST00000463539 Q6ZS49 121 aa15.97■□□□□ 0.15
CCDC78-206ENST00000463539 OR5T2Q8NGG2 359 aa15.97■□□□□ 0.15
CCDC78-206ENST00000463539 Q9N2K0 584 aa15.97■□□□□ 0.15
CCDC78-206ENST00000463539 NECAP2Q9NVZ3 263 aa15.97■□□□□ 0.15
CCDC78-206ENST00000463539 HCFC1P51610 2035 aa15.97■□□□□ 0.15
CCDC78-206ENST00000463539 ICE1Q9Y2F5 2266 aa15.97■□□□□ 0.15
CCDC78-206ENST00000463539 OR2AT4A6NND4 320 aa15.96■□□□□ 0.15
CCDC78-206ENST00000463539 PSPNO60542 156 aa15.96■□□□□ 0.15
CCDC78-206ENST00000463539 PRAF2O60831 178 aa15.96■□□□□ 0.15
CCDC78-206ENST00000463539 CYB5R3P00387 301 aaPredicted RBP15.96■□□□□ 0.15
CCDC78-206ENST00000463539 PSG2P11465 335 aa15.96■□□□□ 0.15
CCDC78-206ENST00000463539 IGFBP2P18065 325 aa15.96■□□□□ 0.15
CCDC78-206ENST00000463539 ANXA7P20073 488 aaKnown RBP15.96■□□□□ 0.15
CCDC78-206ENST00000463539 PRDX2P32119 198 aa15.96■□□□□ 0.15
CCDC78-206ENST00000463539 DACT3Q96B18 629 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms