RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 SMOC1Q9H4F8 434 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 P4HTMQ9NXG6 502 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 MBD1Q9UIS9 605 aaPredicted RBP13.27□□□□□ -0.29
TSC2-206ENST00000439117 CDC42EP2O14613 210 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 ZNF816Q0VGE8 651 aaPredicted RBP13.27□□□□□ -0.29
TSC2-206ENST00000439117 MPV17LQ2QL34 196 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 MRGPREQ86SM8 312 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 OR4B1Q8NGF8 309 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 POM121L2Q96KW2 1035 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 MAP1LC3CQ9BXW4 147 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 NAGKQ9UJ70 344 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 C11orf94C9JXX5 98 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 BPIFA4PQ86YQ2 179 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 OR2M7Q8NG81 312 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 TP53RKQ96S44 253 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 PMS2P1A4D2B8 440 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 ZIC1Q15915 447 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 DEFB124Q8NES8 71 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 NOXO1Q8NFA2 376 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 KTI12Q96EK9 354 aaPredicted RBP13.26□□□□□ -0.29
TSC2-206ENST00000439117 ZNF355PQ9NSJ1 428 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 LRRC30A6NM36 301 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 PDCD6O75340 191 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 DDA1Q9BW61 102 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 TLNRD1Q9H1K6 362 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 CLEC1BQ9P126 229 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 RCC2Q9P258 522 aaKnown RBP13.26□□□□□ -0.29
TSC2-206ENST00000439117 RNF24Q9Y225 148 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 NUP214P35658 2090 aaPredicted RBP13.26□□□□□ -0.29
TSC2-206ENST00000439117 HOXB1P14653 301 aaPredicted RBP13.26□□□□□ -0.29
TSC2-206ENST00000439117 CD82P27701 267 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 OR4C3Q8NH37 302 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 TRMT61AQ96FX7 289 aaKnown RBP13.26□□□□□ -0.29
TSC2-206ENST00000439117 RHOVQ96L33 236 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 MFRPQ9BY79 579 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 PARD6GQ9BYG4 376 aaPredicted RBP13.26□□□□□ -0.29
TSC2-206ENST00000439117 OCIAD1Q9NX40 245 aa13.26□□□□□ -0.29
TSC2-206ENST00000439117 MRM2Q9UI43 246 aaKnown RBP13.26□□□□□ -0.29
TSC2-206ENST00000439117 SPAG17Q6Q759 2223 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 A0A1B0GV90 55 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 CYB5R3P00387 301 aaPredicted RBP13.25□□□□□ -0.29
TSC2-206ENST00000439117 FUT7Q11130 342 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 FOXC1Q12948 553 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 LEMD1Q68G75 181 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 ZNF764Q96H86 408 aaPredicted RBP13.25□□□□□ -0.29
TSC2-206ENST00000439117 ACY3Q96HD9 319 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 ANXA10Q9UJ72 324 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 DHRS3O75911 302 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 TRGC2P03986 189 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 HOXA6P31267 233 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 DSCR4P56555 118 aaPredicted RBP13.25□□□□□ -0.29
TSC2-206ENST00000439117 PRICKLE4Q2TBC4 344 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 ETV3LQ6ZN32 361 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 C6orf201Q7Z4U5 140 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 OR5AS1Q8N127 324 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 OR5D13Q8NGL4 314 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 TMEM167BQ9NRX6 74 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 TIMM9Q9Y5J7 89 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 A0A1B0GTH9 108 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 FFAR1O14842 300 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 SYNGR2O43760 224 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 PDE6DO43924 150 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 SNCGO76070 127 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 F2RP25116 425 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 CDKN2AP42771 156 aaKnown RBP13.25□□□□□ -0.29
TSC2-206ENST00000439117 OR3A1P47881 315 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 EWSR1Q01844 656 aaKnown RBP eCLIP13.25□□□□□ -0.291e-6■■■□□ 14.7
TSC2-206ENST00000439117 MESP2Q0VG99 397 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 OR4A47Q6IF82 309 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 FBLIM1Q8WUP2 373 aa13.25□□□□□ -0.29
TSC2-206ENST00000439117 TRBV23-1A0A0A0MS06 115 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 CXorf65A6NEN9 183 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 RPS4Y1P22090 263 aaKnown RBP13.24□□□□□ -0.29
TSC2-206ENST00000439117 CAMPP49913 170 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 RHBDD2Q6NTF9 364 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 ZG16BQ96DA0 208 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 ERRFI1Q9UJM3 462 aaPredicted RBP13.24□□□□□ -0.29
TSC2-206ENST00000439117 SPINT1O43278 529 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 TNFSF14O43557 240 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 HLA-DQB1P01920 261 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 BRS3P32247 399 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 H1FXQ92522 213 aaKnown RBP13.24□□□□□ -0.29
TSC2-206ENST00000439117 DUSP15Q9H1R2 295 aaPredicted RBP13.24□□□□□ -0.29
TSC2-206ENST00000439117 ZNFX1Q9P2E3 1918 aaKnown RBP13.24□□□□□ -0.29
TSC2-206ENST00000439117 SPTA1P02549 2419 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 PABPC1L2AQ5JQF8 200 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 TMEM255AQ5JRV8 349 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 SLC35E3Q7Z769 313 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 OR2V1Q8NHB1 315 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 ZFP64Q9NPA5 681 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 PCOLCE2Q9UKZ9 415 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 ZMIZ1Q9ULJ6 1067 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 NPIPB8E9PQR5 432 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 SKP2Q13309 424 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 ACSM6Q6P461 480 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 ANKRD37Q7Z713 158 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 H1FOOQ8IZA3 346 aaPredicted RBP13.24□□□□□ -0.29
TSC2-206ENST00000439117 OR1L6Q8NGR2 347 aa13.24□□□□□ -0.29
TSC2-206ENST00000439117 RGP1Q92546 391 aaPredicted RBP13.24□□□□□ -0.29
TSC2-206ENST00000439117 KLK10O43240 276 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms