RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 MRPS15P82914 257 aaKnown RBP19.25■□□□□ 0.67
CPSF4-204ENST00000436336 IFITM3Q01628 133 aa19.25■□□□□ 0.67
CPSF4-204ENST00000436336 SSBP1Q04837 148 aaKnown RBP19.25■□□□□ 0.67
CPSF4-204ENST00000436336 TRAPPC6BQ86SZ2 158 aa19.25■□□□□ 0.67
CPSF4-204ENST00000436336 PEG10Q86TG7 708 aaKnown RBP19.25■□□□□ 0.67
CPSF4-204ENST00000436336 BPIFB2Q8N4F0 458 aa19.25■□□□□ 0.67
CPSF4-204ENST00000436336 CMSS1Q9BQ75 279 aaKnown RBP19.25■□□□□ 0.67
CPSF4-204ENST00000436336 KLK11Q9UBX7 282 aa19.25■□□□□ 0.67
CPSF4-204ENST00000436336 LANCL1O43813 399 aa19.24■□□□□ 0.67
CPSF4-204ENST00000436336 ORC5O43913 435 aa19.24■□□□□ 0.67
CPSF4-204ENST00000436336 NDUFS7O75251 213 aa19.24■□□□□ 0.67
CPSF4-204ENST00000436336 MDH2P40926 338 aaKnown RBP19.24■□□□□ 0.67
CPSF4-204ENST00000436336 BTG1P62324 171 aa19.24■□□□□ 0.67
CPSF4-204ENST00000436336 ZNF787Q6DD87 383 aa19.24■□□□□ 0.67
CPSF4-204ENST00000436336 SDSLQ96GA7 329 aa19.24■□□□□ 0.67
CPSF4-204ENST00000436336 DNTTIP1Q9H147 329 aa19.24■□□□□ 0.67
CPSF4-204ENST00000436336 CHODLQ9H9P2 273 aa19.24■□□□□ 0.67
CPSF4-204ENST00000436336 METRNQ9UJH8 293 aa19.24■□□□□ 0.67
CPSF4-204ENST00000436336 USF3Q68DE3 2245 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 A0A1W2PQ09 198 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 MEIS3P1A6NDR6 274 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 PSPNO60542 156 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 GYPAP02724 150 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 TFF1P04155 84 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 GDNFP39905 211 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 CBX5P45973 191 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 INPP1P49441 399 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 ACTBP60709 375 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 ACTG1P63261 375 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 KCNJ8Q15842 424 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 ATPAF1Q5TC12 328 aaPredicted RBP19.23■□□□□ 0.67
CPSF4-204ENST00000436336 STEAP3Q658P3 488 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 ZNF788Q6ZQV5 615 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 LYSMD2Q8IV50 215 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 ZNF561Q8N587 486 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 PPA2Q9H2U2 334 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 LIME1Q9H400 295 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 ZNF665Q9H7R5 613 aa19.23■□□□□ 0.67
CPSF4-204ENST00000436336 MYOZ1Q9NP98 299 aaPredicted RBP19.23■□□□□ 0.67
CPSF4-204ENST00000436336 AMY2BP19961 511 aa19.22■□□□□ 0.67
CPSF4-204ENST00000436336 KCNJ3P48549 501 aa19.22■□□□□ 0.67
CPSF4-204ENST00000436336 C17orf107Q6ZR85 190 aa19.22■□□□□ 0.67
CPSF4-204ENST00000436336 PPP1R35Q8TAP8 253 aa19.22■□□□□ 0.67
CPSF4-204ENST00000436336 DYRK2Q92630 601 aa19.22■□□□□ 0.67
CPSF4-204ENST00000436336 SNX22Q96L94 193 aa19.22■□□□□ 0.67
CPSF4-204ENST00000436336 OCSTAMPQ9BR26 566 aa19.22■□□□□ 0.67
CPSF4-204ENST00000436336 TMEM165Q9HC07 324 aa19.22■□□□□ 0.67
CPSF4-204ENST00000436336 ETAA1Q9NY74 926 aa19.22■□□□□ 0.67
CPSF4-204ENST00000436336 GCN1Q92616 2671 aaKnown RBP19.22■□□□□ 0.67
CPSF4-204ENST00000436336 TMEM82A0PJX8 343 aa19.22■□□□□ 0.67
CPSF4-204ENST00000436336 ZNF737O75373 536 aa19.22■□□□□ 0.67
CPSF4-204ENST00000436336 ZMYND11Q15326 602 aa19.22■□□□□ 0.67
CPSF4-204ENST00000436336 ASCC1Q8N9N2 400 aaKnown RBP19.22■□□□□ 0.67
CPSF4-204ENST00000436336 C12orf4Q9NQ89 552 aa19.22■□□□□ 0.67
CPSF4-204ENST00000436336 TAS2R8Q9NYW2 309 aa19.22■□□□□ 0.67
CPSF4-204ENST00000436336 MAB21L2Q9Y586 359 aa19.22■□□□□ 0.67
CPSF4-204ENST00000436336 AKAP6Q13023 2319 aa19.22■□□□□ 0.67
CPSF4-204ENST00000436336 NKX6-3A6NJ46 265 aa19.21■□□□□ 0.67
CPSF4-204ENST00000436336 NDUFA2O43678 99 aa19.21■□□□□ 0.67
CPSF4-204ENST00000436336 IGHV2-70P01814 119 aa19.21■□□□□ 0.67
CPSF4-204ENST00000436336 TMEM33P57088 247 aa19.21■□□□□ 0.67
CPSF4-204ENST00000436336 ZNF57Q68EA5 555 aaPredicted RBP19.21■□□□□ 0.67
CPSF4-204ENST00000436336 DCDC5Q6ZRR9 648 aa19.21■□□□□ 0.67
CPSF4-204ENST00000436336 TOMM5Q8N4H5 51 aa19.21■□□□□ 0.67
CPSF4-204ENST00000436336 TIMD4Q96H15 378 aa19.21■□□□□ 0.67
CPSF4-204ENST00000436336 GAFA1Q96PS6 74 aa19.21■□□□□ 0.67
CPSF4-204ENST00000436336 HDHD3Q9BSH5 251 aaPredicted RBP19.21■□□□□ 0.67
CPSF4-204ENST00000436336 CHST6Q9GZX3 395 aa19.21■□□□□ 0.67
CPSF4-204ENST00000436336 SHARPINQ9H0F6 387 aa19.21■□□□□ 0.67
CPSF4-204ENST00000436336 RIMS4Q9H426 269 aaPredicted RBP19.21■□□□□ 0.67
CPSF4-204ENST00000436336 IFT46Q9NQC8 304 aa19.21■□□□□ 0.67
CPSF4-204ENST00000436336 ZNF701Q9NV72 531 aaPredicted RBP19.21■□□□□ 0.67
CPSF4-204ENST00000436336 CRYBG3Q68DQ2 2970 aa19.21■□□□□ 0.67
CPSF4-204ENST00000436336 TNFRSF13BO14836 293 aaPredicted RBP19.2■□□□□ 0.66
CPSF4-204ENST00000436336 ECDO95905 644 aaPredicted RBP19.2■□□□□ 0.66
CPSF4-204ENST00000436336 IGHV4-39P01824 125 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 CSN2P05814 226 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 GSTT2BP0CG30 244 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 DTYMKP23919 212 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 RCVRNP35243 200 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 OR3A1P47881 315 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 OR4S1Q8NGB4 309 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 RAB1CQ92928 201 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 CCL13Q99616 98 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 ANAPC10Q9UM13 185 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 ISPDA4D126 451 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 K7N7A8 449 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 SIGLEC5O15389 551 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 NAPSAO96009 420 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 CSF1P09603 554 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 IL13RA1P78552 427 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 ATXN7L3Q14CW9 347 aaPredicted RBP19.2■□□□□ 0.66
CPSF4-204ENST00000436336 MUC20Q8N307 709 aaPredicted RBP19.2■□□□□ 0.66
CPSF4-204ENST00000436336 GVQW1Q8N7I0 195 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 ZNRF1Q8ND25 227 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 PLPPR1Q8TBJ4 325 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 NRGNQ92686 78 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 MED30Q96HR3 178 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 TMEM246Q9BRR3 403 aa19.2■□□□□ 0.66
CPSF4-204ENST00000436336 FAM234AQ9H0X4 552 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms