RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 GMFBP60983 142 aa15.32■□□□□ 0.04
HMGN1-206ENST00000431390 OXA1LQ15070 435 aa15.32■□□□□ 0.04
HMGN1-206ENST00000431390 TMEM229BQ8NBD8 167 aa15.32■□□□□ 0.04
HMGN1-206ENST00000431390 IFT46Q9NQC8 304 aa15.32■□□□□ 0.04
HMGN1-206ENST00000431390 AK3Q9UIJ7 227 aa15.32■□□□□ 0.04
HMGN1-206ENST00000431390 ABCA4P78363 2273 aa15.32■□□□□ 0.04
HMGN1-206ENST00000431390 MTORP42345 2549 aa15.32■□□□□ 0.04
HMGN1-206ENST00000431390 LRRC30A6NM36 301 aa15.32■□□□□ 0.04
HMGN1-206ENST00000431390 VGLL3A8MV65 326 aa15.32■□□□□ 0.04
HMGN1-206ENST00000431390 MCRIP1C9JLW8 97 aa15.32■□□□□ 0.04
HMGN1-206ENST00000431390 C3orf80F5H4A9 247 aa15.32■□□□□ 0.04
HMGN1-206ENST00000431390 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.32■□□□□ 0.04
HMGN1-206ENST00000431390 HAND1O96004 215 aa15.32■□□□□ 0.04
HMGN1-206ENST00000431390 ZNF44P15621 663 aa15.32■□□□□ 0.04
HMGN1-206ENST00000431390 MRPS15P82914 257 aaKnown RBP15.32■□□□□ 0.04
HMGN1-206ENST00000431390 RBM39Q14498 530 aaKnown RBP15.32■□□□□ 0.04
HMGN1-206ENST00000431390 SUMF2Q8NBJ7 301 aa15.32■□□□□ 0.04
HMGN1-206ENST00000431390 CMSS1Q9BQ75 279 aaKnown RBP15.32■□□□□ 0.04
HMGN1-206ENST00000431390 TRAV24A0A0B4J272 114 aa15.31■□□□□ 0.04
HMGN1-206ENST00000431390 NAP1L6A6NFF2 107 aa15.31■□□□□ 0.04
HMGN1-206ENST00000431390 OR2H2O95918 312 aa15.31■□□□□ 0.04
HMGN1-206ENST00000431390 CD8AP01732 235 aa15.31■□□□□ 0.04
HMGN1-206ENST00000431390 NAT1P18440 290 aa15.31■□□□□ 0.04
HMGN1-206ENST00000431390 DTYMKP23919 212 aa15.31■□□□□ 0.04
HMGN1-206ENST00000431390 LMO1P25800 156 aa15.31■□□□□ 0.04
HMGN1-206ENST00000431390 TAS2R19P59542 299 aa15.31■□□□□ 0.04
HMGN1-206ENST00000431390 TRIM16LQ309B1 348 aa15.31■□□□□ 0.04
HMGN1-206ENST00000431390 CYYR1Q96J86 154 aa15.31■□□□□ 0.04
HMGN1-206ENST00000431390 TRAF4Q9BUZ4 470 aaPredicted RBP15.31■□□□□ 0.04
HMGN1-206ENST00000431390 DPCDQ9BVM2 203 aaPredicted RBP15.31■□□□□ 0.04
HMGN1-206ENST00000431390 CHST6Q9GZX3 395 aa15.31■□□□□ 0.04
HMGN1-206ENST00000431390 NLKQ9UBE8 527 aa15.31■□□□□ 0.04
HMGN1-206ENST00000431390 UBE2QL1A1L167 161 aa15.3■□□□□ 0.04
HMGN1-206ENST00000431390 SLC33A1O00400 549 aaPredicted RBP15.3■□□□□ 0.04
HMGN1-206ENST00000431390 SOD3P08294 240 aa15.3■□□□□ 0.04
HMGN1-206ENST00000431390 AKAIN1P0CW23 69 aa15.3■□□□□ 0.04
HMGN1-206ENST00000431390 FAUP35544 74 aaKnown RBP15.3■□□□□ 0.04
HMGN1-206ENST00000431390 SHEQ5VZ18 495 aa15.3■□□□□ 0.04
HMGN1-206ENST00000431390 BRICD5Q6PL45 260 aa15.3■□□□□ 0.04
HMGN1-206ENST00000431390 DCDC5Q6ZRR9 648 aa15.3■□□□□ 0.04
HMGN1-206ENST00000431390 C1orf87Q8N0U7 546 aa15.3■□□□□ 0.04
HMGN1-206ENST00000431390 CENPSQ8N2Z9 138 aa15.3■□□□□ 0.04
HMGN1-206ENST00000431390 GVQW1Q8N7I0 195 aa15.3■□□□□ 0.04
HMGN1-206ENST00000431390 HRASLSQ9HDD0 168 aa15.3■□□□□ 0.04
HMGN1-206ENST00000431390 DNAJB11Q9UBS4 358 aa15.3■□□□□ 0.04
HMGN1-206ENST00000431390 OR14J1Q9UGF5 321 aa15.3■□□□□ 0.04
HMGN1-206ENST00000431390 WIPI2Q9Y4P8 454 aa15.3■□□□□ 0.04
HMGN1-206ENST00000431390 CYB5R3P00387 301 aaPredicted RBP15.29■□□□□ 0.04
HMGN1-206ENST00000431390 MDH2P40926 338 aaKnown RBP15.29■□□□□ 0.04
HMGN1-206ENST00000431390 RFX2P48378 723 aa15.29■□□□□ 0.04
HMGN1-206ENST00000431390 GDPD3Q7L5L3 318 aa15.29■□□□□ 0.04
HMGN1-206ENST00000431390 NRARPQ7Z6K4 114 aa15.29■□□□□ 0.04
HMGN1-206ENST00000431390 HOGA1Q86XE5 327 aa15.29■□□□□ 0.04
HMGN1-206ENST00000431390 RDH5Q92781 318 aa15.29■□□□□ 0.04
HMGN1-206ENST00000431390 VRK1Q99986 396 aaPredicted RBP15.29■□□□□ 0.04
HMGN1-206ENST00000431390 RAB1BQ9H0U4 201 aa15.29■□□□□ 0.04
HMGN1-206ENST00000431390 UBTD1Q9HAC8 227 aa15.29■□□□□ 0.04
HMGN1-206ENST00000431390 C12orf4Q9NQ89 552 aa15.29■□□□□ 0.04
HMGN1-206ENST00000431390 TREM2Q9NZC2 230 aa15.29■□□□□ 0.04
HMGN1-206ENST00000431390 RFPL4AA6NLU0 287 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 OR2AT4A6NND4 320 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 ZNF736B4DX44 427 aaPredicted RBP15.28■□□□□ 0.04
HMGN1-206ENST00000431390 RFPL4AL1F8VTS6 287 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 SIRPB1O00241 398 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 CD74P04233 296 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 PSG2P11465 335 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 TBPP20226 339 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 HOXA4Q00056 320 aaPredicted RBP15.28■□□□□ 0.04
HMGN1-206ENST00000431390 PAN3Q58A45 887 aaKnown RBP15.28■□□□□ 0.04
HMGN1-206ENST00000431390 TEX36Q5VZQ5 186 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 STEAP1BQ6NZ63 245 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 BOLLQ8N9W6 283 aaKnown RBP15.28■□□□□ 0.04
HMGN1-206ENST00000431390 ENKURQ8TC29 256 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 NEK7Q8TDX7 302 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 HDHD3Q9BSH5 251 aaPredicted RBP15.28■□□□□ 0.04
HMGN1-206ENST00000431390 RIMS4Q9H426 269 aaPredicted RBP15.28■□□□□ 0.04
HMGN1-206ENST00000431390 TMEM106BQ9NUM4 274 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 EDARQ9UNE0 448 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 IGHV1-69-2A0A0G2JMI3 117 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 HPXP02790 462 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 CD3DP04234 171 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 FCGR3AP08637 254 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 MUC1P15941 1255 aaPredicted RBP15.28■□□□□ 0.04
HMGN1-206ENST00000431390 CD80P33681 288 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 BTCP35070 178 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 MICBQ29980 383 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 ACTBL2Q562R1 376 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 DYRK2Q92630 601 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 SNAPC3Q92966 411 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 ZNF701Q9NV72 531 aaPredicted RBP15.28■□□□□ 0.04
HMGN1-206ENST00000431390 ETAA1Q9NY74 926 aa15.28■□□□□ 0.04
HMGN1-206ENST00000431390 IGKV1D-17A0A075B6S4 117 aa15.27■□□□□ 0.03
HMGN1-206ENST00000431390 FAM240BA0A1B0GVZ2 78 aa15.27■□□□□ 0.03
HMGN1-206ENST00000431390 POM121CA8CG34 1229 aa15.27■□□□□ 0.03
HMGN1-206ENST00000431390 TMEM178BH3BS89 294 aa15.27■□□□□ 0.03
HMGN1-206ENST00000431390 HSPB6O14558 160 aa15.27■□□□□ 0.03
HMGN1-206ENST00000431390 NAPSAO96009 420 aa15.27■□□□□ 0.03
HMGN1-206ENST00000431390 SLC6A1P30531 599 aa15.27■□□□□ 0.03
HMGN1-206ENST00000431390 PRDX2P32119 198 aa15.27■□□□□ 0.03
HMGN1-206ENST00000431390 KCNJ3P48549 501 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms