RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 ACTBL2Q562R1 376 aa7.21□□□□□ -1.26
CD44-208ENST00000428726 CLRN3Q8NCR9 226 aa7.21□□□□□ -1.26
CD44-208ENST00000428726 OR6K3Q8NGY3 331 aa7.21□□□□□ -1.26
CD44-208ENST00000428726 OR51H1Q8NH63 302 aa7.21□□□□□ -1.26
CD44-208ENST00000428726 PP6455Q8WZ26 134 aa7.21□□□□□ -1.26
CD44-208ENST00000428726 HAS2Q92819 552 aa7.21□□□□□ -1.26
CD44-208ENST00000428726 C10orf35Q96D05 121 aa7.21□□□□□ -1.26
CD44-208ENST00000428726 C12orf57Q99622 126 aa7.21□□□□□ -1.26
CD44-208ENST00000428726 MSL2Q9HCI7 577 aa7.21□□□□□ -1.26
CD44-208ENST00000428726 RASL12Q9NYN1 266 aa7.21□□□□□ -1.26
CD44-208ENST00000428726 V9GYS6 101 aa7.21□□□□□ -1.26
CD44-208ENST00000428726 ZNF44P15621 663 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 OTX1P32242 354 aaPredicted RBP7.2□□□□□ -1.26
CD44-208ENST00000428726 CBX5P45973 191 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 SLC10A1Q14973 349 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 RPUSD3Q6P087 351 aaKnown RBP7.2□□□□□ -1.26
CD44-208ENST00000428726 OVCH2Q7RTZ1 564 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 TMEM217Q8N7C4 229 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 APH1AQ96BI3 265 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 ANAPC10Q9UM13 185 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 CALCRP30988 508 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 CD80P33681 288 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 ALDH3B1P43353 468 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 TAS2R31P59538 309 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 PRDX4Q13162 271 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 CLINT1Q14677 625 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 VWA1Q6PCB0 445 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 C20orf204Q6ZNR8 217 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 Q6ZSR3 168 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 SLC16A13Q7RTY0 426 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 ARRDC1Q8N5I2 433 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 RFESDQ8TAC1 157 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 MITD1Q8WV92 249 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 RSRP1Q9BUV0 290 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 OR2J1Q9GZK6 312 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 METTL9Q9H1A3 318 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 DNAJB11Q9UBS4 358 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 TNFSF18Q9UNG2 199 aa7.2□□□□□ -1.26
CD44-208ENST00000428726 RBM7Q9Y580 266 aaKnown RBP7.2□□□□□ -1.26
CD44-208ENST00000428726 A0A0D9SG52 128 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 PROB1E7EW31 1015 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 WNT9BO14905 357 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 PHF1O43189 567 aaPredicted RBP7.19□□□□□ -1.26
CD44-208ENST00000428726 LRP3O75074 770 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 SP1P08047 785 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 SPP1P10451 314 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 NAT2P11245 290 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 ABCA11PQ4W5N1 156 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 PAN3Q58A45 887 aaKnown RBP7.19□□□□□ -1.26
CD44-208ENST00000428726 ZNF766Q5HY98 468 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 VAX1Q5SQQ9 334 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 RPL7L1Q6DKI1 246 aaKnown RBP7.19□□□□□ -1.26
CD44-208ENST00000428726 MDP1Q86V88 176 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 HOGA1Q86XE5 327 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 FAM89BQ8N5H3 189 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 ADGRG7Q96K78 797 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 FAM173AQ9BQD7 235 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 OCSTAMPQ9BR26 566 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.19□□□□□ -1.26
CD44-208ENST00000428726 VPS13CQ709C8 3753 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 A6NLC8 198 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 DEFB108AA8MXU0 73 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 CDIPTO14735 213 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 CRYGSP22914 178 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 CPT2P23786 658 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 PPT1P50897 306 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 ARL6IP1Q15041 203 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 HSD17B11Q8NBQ5 300 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 OR5AP2Q8NGF4 316 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 OR52M1Q8NGK5 317 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 EMG1Q92979 244 aaKnown RBP7.19□□□□□ -1.26
CD44-208ENST00000428726 ZPBPQ9BS86 351 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 FAM234AQ9H0X4 552 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 MED9Q9NWA0 146 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 MTCH1Q9NZJ7 389 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 DUSP13Q9UII6 198 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 TINAGQ9UJW2 476 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 SLC7A11Q9UPY5 501 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 FIGNL2A6NMB9 653 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 C9JQL5 133 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 BCL2L11O43521 198 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 DUS4LO95620 317 aaKnown RBP7.19□□□□□ -1.26
CD44-208ENST00000428726 SLC25A4P12235 298 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 COL8A2P25067 703 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 PDZK1IP1Q13113 114 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 RAB35Q15286 201 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 ZNF528Q3MIS6 628 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 SPINK9Q5DT21 86 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 FAM201AQ5SY85 155 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 RBMS3Q6XE24 437 aaKnown RBP7.19□□□□□ -1.26
CD44-208ENST00000428726 ACOT7LQ6ZUV0 252 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 LINC00518Q8N0U6 118 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 OSR2Q8N2R0 312 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 SCGB3A2Q96PL1 93 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 RNF126Q9BV68 326 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 BARX1Q9HBU1 254 aaPredicted RBP7.19□□□□□ -1.26
CD44-208ENST00000428726 ZNF71Q9NQZ8 489 aaPredicted RBP7.19□□□□□ -1.26
CD44-208ENST00000428726 GPR132Q9UNW8 380 aa7.19□□□□□ -1.26
CD44-208ENST00000428726 ZFHX3Q15911 3703 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 IGHV3-43A0A0B4J1X8 118 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms