RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 C18orf12Q96KH6 178 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 MSL2Q9HCI7 577 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 EHFQ9NZC4 300 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 TBC1D29Q9UFV1 150 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 SLC45A2Q9UMX9 530 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 CYP8B1Q9UNU6 501 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 MSTNO14793 375 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 SLC25A6P12236 298 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 ZNF674Q2M3X9 581 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 NCR3LG1Q68D85 454 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 GBGT1Q8N5D6 347 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 SEMA6DQ8NFY4 1073 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 OR1N1Q8NGS0 311 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 C22orf15Q8WYQ4 148 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 FAAP24Q9BTP7 215 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 MAGT1Q9H0U3 335 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 GPR173Q9NS66 373 aa4.46□□□□□ -1.69
RIF1-203ENST00000428287 CHTOPQ9Y3Y2 248 aaKnown RBP4.46□□□□□ -1.69
RIF1-203ENST00000428287 TGIF2-C20orf24A0A0A6YYL0 155 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 RHOGP84095 191 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 IL24Q13007 206 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 GPM6BQ13491 265 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 CNKSR3Q6P9H4 555 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 ZNF66Q6ZN08 573 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 ODF3L1Q8IXM7 274 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 LYG1Q8N1E2 194 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 CD300LFQ8TDQ1 290 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 FAM3CQ92520 227 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 NKD1Q969G9 470 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 MRPL24Q96A35 216 aaKnown RBP4.46□□□□□ -1.7
RIF1-203ENST00000428287 SIGLEC12Q96PQ1 595 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 APOOQ9BUR5 198 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 HCFC2Q9Y5Z7 792 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 PLPP3O14495 311 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 HS3ST1O14792 307 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 LMX1BO60663 402 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 KISS1Q15726 138 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 MORN2Q502X0 79 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 FAM78AQ5JUQ0 283 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 DMRTA1Q5VZB9 504 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 MARCH3Q86UD3 253 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 CADM4Q8NFZ8 388 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 BAHD1Q8TBE0 780 aaPredicted RBP4.46□□□□□ -1.7
RIF1-203ENST00000428287 RASL10BQ96S79 203 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 LPAR2Q9HBW0 351 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 CAPN10Q9HC96 672 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 GLRX2Q9NS18 164 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 ZNF319Q9P2F9 582 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 SLC7A11Q9UPY5 501 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 F8P00451 2351 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 HRKO00198 91 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 QDPRP09417 244 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 IDH3GP51553 393 aaPredicted RBP4.46□□□□□ -1.7
RIF1-203ENST00000428287 PAX9P55771 341 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 KLF3P57682 345 aaPredicted RBP4.46□□□□□ -1.7
RIF1-203ENST00000428287 LINC00310P59036 64 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 COL5A1-AS1Q5SY13 56 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 SHISA5Q8N114 240 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 LGI3Q8N145 548 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 SPIN2AQ99865 258 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 SPIN2BQ9BPZ2 258 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 ZFYVE21Q9BQ24 234 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 IGHV2OR16-5A0A0B4J2B6 119 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 BLACEA4D250 179 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 WISP2O76076 250 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 AMY2BP19961 511 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 ZNF133P52736 654 aaPredicted RBP4.46□□□□□ -1.7
RIF1-203ENST00000428287 YPEL3P61236 119 aaPredicted RBP4.46□□□□□ -1.7
RIF1-203ENST00000428287 ODF4Q2M2E3 257 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 COX15Q7KZN9 410 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 LYZL2Q7Z4W2 148 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 ZNF295-AS1Q8N0V1 137 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 OR52R1Q8NGF1 315 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 RNF138Q8WVD3 245 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 MOB3AQ96BX8 217 aa4.46□□□□□ -1.7
RIF1-203ENST00000428287 NXF5Q9H1B4 397 aaKnown RBP4.46□□□□□ -1.7
RIF1-203ENST00000428287 TRAV36DV7A0A075B6V5 113 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 TMPRSS2O15393 492 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 KBTBD11O94819 623 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 AHSA1O95433 338 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 SRSF7Q16629 238 aaKnown RBP eCLIP4.45□□□□□ -1.7
RIF1-203ENST00000428287 NUFIP2Q7Z417 695 aaKnown RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 CISD2Q8N5K1 135 aaKnown RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 Q96M66 194 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 GABRG3Q99928 467 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 STARD5Q9NSY2 213 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 IL36GQ9NZH8 169 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 GAB2Q9UQC2 676 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 POLR3KQ9Y2Y1 108 aaPredicted RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 A0A1W2PQD3 144 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 OTOL1A6NHN0 477 aaPredicted RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 NUDT14O95848 222 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 MPIG6BO95866 241 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 MPLP40238 635 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 ELLP55199 621 aaPredicted RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 EWSR1Q01844 656 aaKnown RBP eCLIP4.45□□□□□ -1.7
RIF1-203ENST00000428287 HIST3H3Q16695 136 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 RNF44Q7L0R7 432 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 RPP25LQ8N5L8 163 aaKnown RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 GMPPAQ96IJ6 420 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms