RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 LMO1P25800 156 aa18.23■□□□□ 0.51
PTCHD3P2-201ENST00000424937 INSL4Q14641 139 aa18.23■□□□□ 0.51
PTCHD3P2-201ENST00000424937 PIGYQ3MUY2 71 aa18.23■□□□□ 0.51
PTCHD3P2-201ENST00000424937 RBM48Q5RL73 367 aaKnown RBP18.23■□□□□ 0.51
PTCHD3P2-201ENST00000424937 C12orf54Q6X4T0 127 aa18.23■□□□□ 0.51
PTCHD3P2-201ENST00000424937 ASCL4Q6XD76 172 aa18.23■□□□□ 0.51
PTCHD3P2-201ENST00000424937 PRSS48Q7RTY5 328 aa18.23■□□□□ 0.51
PTCHD3P2-201ENST00000424937 TRAPPC6BQ86SZ2 158 aa18.23■□□□□ 0.51
PTCHD3P2-201ENST00000424937 LDLRAD3Q86YD5 345 aa18.23■□□□□ 0.51
PTCHD3P2-201ENST00000424937 SSMEM1Q8WWF3 244 aa18.23■□□□□ 0.51
PTCHD3P2-201ENST00000424937 UFD1Q92890 307 aa18.23■□□□□ 0.51
PTCHD3P2-201ENST00000424937 METTL9Q9H1A3 318 aa18.23■□□□□ 0.51
PTCHD3P2-201ENST00000424937 HEXA-AS1Q9H8Q6 139 aa18.23■□□□□ 0.51
PTCHD3P2-201ENST00000424937 ING3Q9NXR8 418 aa18.23■□□□□ 0.51
PTCHD3P2-201ENST00000424937 BLOC1S6Q9UL45 172 aa18.23■□□□□ 0.51
PTCHD3P2-201ENST00000424937 LINC00312Q9Y6C7 94 aa18.23■□□□□ 0.51
PTCHD3P2-201ENST00000424937 A0A0G2JK05 382 aa18.22■□□□□ 0.51
PTCHD3P2-201ENST00000424937 TMEM89A2RUT3 159 aa18.22■□□□□ 0.51
PTCHD3P2-201ENST00000424937 HSPB6O14558 160 aa18.22■□□□□ 0.51
PTCHD3P2-201ENST00000424937 PAHP00439 452 aa18.22■□□□□ 0.51
PTCHD3P2-201ENST00000424937 HSMCR30P0CW71 290 aa18.22■□□□□ 0.51
PTCHD3P2-201ENST00000424937 SERPINA2P20848 420 aa18.22■□□□□ 0.51
PTCHD3P2-201ENST00000424937 ERP29P30040 261 aaKnown RBP18.22■□□□□ 0.51
PTCHD3P2-201ENST00000424937 IL13RA2Q14627 380 aa18.22■□□□□ 0.51
PTCHD3P2-201ENST00000424937 ATXN7L3Q14CW9 347 aaPredicted RBP18.22■□□□□ 0.51
PTCHD3P2-201ENST00000424937 MS4A15Q8N5U1 240 aa18.22■□□□□ 0.51
PTCHD3P2-201ENST00000424937 OR51T1Q8NGJ9 327 aa18.22■□□□□ 0.51
PTCHD3P2-201ENST00000424937 IL36GQ9NZH8 169 aa18.22■□□□□ 0.51
PTCHD3P2-201ENST00000424937 ZNRD1Q9P1U0 126 aa18.22■□□□□ 0.51
PTCHD3P2-201ENST00000424937 RRP15Q9Y3B9 282 aaKnown RBP18.22■□□□□ 0.51
PTCHD3P2-201ENST00000424937 IGHV4-59P01825 116 aa18.21■□□□□ 0.51
PTCHD3P2-201ENST00000424937 RBP4P02753 201 aa18.21■□□□□ 0.51
PTCHD3P2-201ENST00000424937 CSTBP04080 98 aaKnown RBP18.21■□□□□ 0.51
PTCHD3P2-201ENST00000424937 AESQ08117 197 aa18.21■□□□□ 0.51
PTCHD3P2-201ENST00000424937 MIDNQ504T8 468 aa18.21■□□□□ 0.51
PTCHD3P2-201ENST00000424937 ACSM3Q53FZ2 586 aa18.21■□□□□ 0.51
PTCHD3P2-201ENST00000424937 LIPKQ5VXJ0 399 aa18.21■□□□□ 0.51
PTCHD3P2-201ENST00000424937 OSR2Q8N2R0 312 aa18.21■□□□□ 0.51
PTCHD3P2-201ENST00000424937 TMEM86BQ8N661 226 aa18.21■□□□□ 0.51
PTCHD3P2-201ENST00000424937 MUL1Q969V5 352 aa18.21■□□□□ 0.51
PTCHD3P2-201ENST00000424937 CHIAQ9BZP6 476 aa18.21■□□□□ 0.51
PTCHD3P2-201ENST00000424937 FUOMA2VDF0 154 aa18.2■□□□□ 0.5
PTCHD3P2-201ENST00000424937 CSN2P05814 226 aa18.2■□□□□ 0.5
PTCHD3P2-201ENST00000424937 IGHV1-8P0DP01 117 aa18.2■□□□□ 0.5
PTCHD3P2-201ENST00000424937 MAP2K4P45985 399 aa18.2■□□□□ 0.5
PTCHD3P2-201ENST00000424937 RBM11P57052 281 aaKnown RBP18.2■□□□□ 0.5
PTCHD3P2-201ENST00000424937 SLC22A6Q4U2R8 563 aa18.2■□□□□ 0.5
PTCHD3P2-201ENST00000424937 PAN3Q58A45 887 aaKnown RBP18.2■□□□□ 0.5
PTCHD3P2-201ENST00000424937 FAM27D1Q5T7N8 215 aa18.2■□□□□ 0.5
PTCHD3P2-201ENST00000424937 C16orf87Q6PH81 154 aa18.2■□□□□ 0.5
PTCHD3P2-201ENST00000424937 Q8NFD4 153 aa18.2■□□□□ 0.5
PTCHD3P2-201ENST00000424937 Q9H521 79 aa18.2■□□□□ 0.5
PTCHD3P2-201ENST00000424937 MRPS28Q9Y2Q9 187 aaKnown RBP18.2■□□□□ 0.5
PTCHD3P2-201ENST00000424937 POMT1Q9Y6A1 747 aa18.2■□□□□ 0.5
PTCHD3P2-201ENST00000424937 TRGV10A0A0A0MS01 117 aa18.19■□□□□ 0.5
PTCHD3P2-201ENST00000424937 CLPXO76031 633 aa18.19■□□□□ 0.5
PTCHD3P2-201ENST00000424937 HKR1P10072 659 aa18.19■□□□□ 0.5
PTCHD3P2-201ENST00000424937 IER3P46695 156 aa18.19■□□□□ 0.5
PTCHD3P2-201ENST00000424937 GLIPR1P48060 266 aa18.19■□□□□ 0.5
PTCHD3P2-201ENST00000424937 GPR50Q13585 617 aa18.19■□□□□ 0.5
PTCHD3P2-201ENST00000424937 KRBOX4Q5JUW0 171 aa18.19■□□□□ 0.5
PTCHD3P2-201ENST00000424937 NKAIN3Q8N8D7 197 aa18.19■□□□□ 0.5
PTCHD3P2-201ENST00000424937 C17orf50Q8WW18 174 aa18.19■□□□□ 0.5
PTCHD3P2-201ENST00000424937 COQ2Q96H96 371 aa18.19■□□□□ 0.5
PTCHD3P2-201ENST00000424937 ST3GAL6Q9Y274 331 aa18.19■□□□□ 0.5
PTCHD3P2-201ENST00000424937 UBE2J1Q9Y385 318 aaPredicted RBP18.19■□□□□ 0.5
PTCHD3P2-201ENST00000424937 TRAV24A0A0B4J272 114 aa18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 A0A1W2PP11 408 aa18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 ODAMA1E959 279 aa18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 ZNF780AO75290 641 aaPredicted RBP18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 COMPP49747 757 aaPredicted RBP18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 MLLT11Q13015 90 aaPredicted RBP18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 TBCEQ15813 527 aaPredicted RBP18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 AWAT2Q6E213 333 aa18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 GLIPR1L1Q6UWM5 242 aa18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 UNQ9370/PRO34162Q6UXP9 181 aa18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 OR13D1Q8NGV5 346 aa18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 TAF15Q92804 592 aaKnown RBP eCLIP18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 TMEM203Q969S6 136 aa18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 PPIL3Q9H2H8 161 aaKnown RBP18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 DPAGT1Q9H3H5 408 aa18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 TCF7L1Q9HCS4 588 aa18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 ISYNA1Q9NPH2 558 aa18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 ZNF581Q9P0T4 197 aa18.18■□□□□ 0.5
PTCHD3P2-201ENST00000424937 BTBD17A6NE02 478 aa18.17■□□□□ 0.5
PTCHD3P2-201ENST00000424937 FAM181BA6NEQ2 426 aa18.17■□□□□ 0.5
PTCHD3P2-201ENST00000424937 OR7C1O76099 320 aaPredicted RBP18.17■□□□□ 0.5
PTCHD3P2-201ENST00000424937 LGALS4P56470 323 aa18.17■□□□□ 0.5
PTCHD3P2-201ENST00000424937 RPS25P62851 125 aaKnown RBP18.17■□□□□ 0.5
PTCHD3P2-201ENST00000424937 AWAT1Q58HT5 328 aa18.17■□□□□ 0.5
PTCHD3P2-201ENST00000424937 NHLRC3Q5JS37 347 aa18.17■□□□□ 0.5
PTCHD3P2-201ENST00000424937 CEACAM19Q7Z692 300 aa18.17■□□□□ 0.5
PTCHD3P2-201ENST00000424937 CDH26Q8IXH8 852 aa18.17■□□□□ 0.5
PTCHD3P2-201ENST00000424937 OR4D6Q8NGJ1 314 aa18.17■□□□□ 0.5
PTCHD3P2-201ENST00000424937 GAL3ST2Q9H3Q3 398 aa18.17■□□□□ 0.5
PTCHD3P2-201ENST00000424937 PCDHB16Q9NRJ7 776 aa18.17■□□□□ 0.5
PTCHD3P2-201ENST00000424937 SESN1Q9Y6P5 492 aa18.17■□□□□ 0.5
PTCHD3P2-201ENST00000424937 ANK2Q01484 3957 aa18.17■□□□□ 0.5
PTCHD3P2-201ENST00000424937 GEMIN2O14893 280 aaKnown RBP18.16■□□□□ 0.5
PTCHD3P2-201ENST00000424937 SC5DO75845 299 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms