RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 TMPRSS13Q9BYE2 586 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 GP6Q9HCN6 339 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 RPH3ALQ9UNE2 315 aa8.44□□□□□ -1.06
CMSS1-201ENST00000421999 ZNF705EA8MWA4 302 aaPredicted RBP8.43□□□□□ -1.06
CMSS1-201ENST00000421999 SYNGR3O43761 229 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 FCGR3BO75015 233 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 OR8U8P0C7N1 319 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 PDZK1IP1Q13113 114 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 VMA21Q3ZAQ7 101 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 LYSMD2Q8IV50 215 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 SPAG16Q8N0X2 631 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 HSD17B11Q8NBQ5 300 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 KLF14Q8TD94 323 aaPredicted RBP8.43□□□□□ -1.06
CMSS1-201ENST00000421999 ELOVL5Q9NYP7 299 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 RALYQ9UKM9 306 aaKnown RBP8.43□□□□□ -1.06
CMSS1-201ENST00000421999 ZMIZ1Q9ULJ6 1067 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 MED13Q9UHV7 2174 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 SULT1C2O00338 296 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 TMEM11P17152 192 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 TBPP20226 339 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 HNF1AP20823 631 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 TUBG1P23258 451 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 S100A7P31151 101 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 NSUN5P2Q63ZY6 315 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 OR4C16Q8NGL9 310 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 C10orf35Q96D05 121 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 MRPS18CQ9Y3D5 142 aaKnown RBP8.43□□□□□ -1.06
CMSS1-201ENST00000421999 GTF3C1Q12789 2109 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 CDH23Q9H251 3354 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 F2RL2O00254 374 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 WISP1O95388 367 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 IGHMP01871 453 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 SSTR2P30874 369 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 BRS3P32247 399 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 ROM1Q03395 351 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 SP6Q3SY56 376 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 LINC00299Q6ZSB3 139 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 TERB2Q8NHR7 220 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 SLC35E1Q96K37 410 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 CA10Q9NS85 328 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 UBQLN2Q9UHD9 624 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 NAAAQ02083 359 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 CELF2-AS1Q8N7Q2 184 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 SMIM4Q8WVI0 70 aa8.43□□□□□ -1.06
CMSS1-201ENST00000421999 SLC25A10Q9UBX3 287 aaPredicted RBP8.43□□□□□ -1.06
CMSS1-201ENST00000421999 PHF3Q92576 2039 aaKnown RBP8.42□□□□□ -1.06
CMSS1-201ENST00000421999 PCP4L1A6NKN8 68 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 NUDT19A8MXV4 375 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 PYCARD-AS1I3L0S3 204 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 GYPAP02724 150 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 AADACP22760 399 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 FCN2Q15485 313 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 PIGYQ3MUY2 71 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 SPNS3Q6ZMD2 512 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 RFPL4BQ6ZWI9 263 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 MDS2Q8NDY4 140 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 GPX8Q8TED1 209 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 PERPQ96FX8 193 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 MS4A7Q9GZW8 240 aaPredicted RBP8.42□□□□□ -1.06
CMSS1-201ENST00000421999 TAF9BQ9HBM6 251 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 IL36GQ9NZH8 169 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 SPRR3Q9UBC9 169 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 SHANK1Q9Y566 2161 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 A0A0B4J2A0 478 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 E9PLN8 166 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 K7ENP7 123 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 GPR31O00270 319 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 ST8SIA5O15466 376 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 SOCS1O15524 211 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 SMPD2O60906 423 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 ADH4P08319 380 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 CECR9P0C854 216 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 CT45A6P0DMU7 189 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 CT45A5P0DMU8 189 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 CT45A7P0DMV0 189 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 TPT1P13693 172 aaKnown RBP8.42□□□□□ -1.06
CMSS1-201ENST00000421999 GNLYP22749 145 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 PTBP1P26599 531 aaKnown RBP eCLIP8.42□□□□□ -1.061e-10■■■■■ 30.5
CMSS1-201ENST00000421999 KCNJ3P48549 501 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 RRAS2P62070 204 aaPredicted RBP8.42□□□□□ -1.06
CMSS1-201ENST00000421999 MRPS11P82912 194 aaKnown RBP8.42□□□□□ -1.06
CMSS1-201ENST00000421999 AESQ08117 197 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 CT45A1Q5HYN5 189 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 H3F3CQ6NXT2 135 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 CT45A3Q8NHU0 189 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 ZNF524Q96C55 264 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 VKORC1Q9BQB6 163 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 PBDC1Q9BVG4 233 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 MAGT1Q9H0U3 335 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 SHPKQ9UHJ6 478 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 FLVCR2Q9UPI3 526 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 TLN1Q9Y490 2541 aaKnown RBP8.42□□□□□ -1.06
CMSS1-201ENST00000421999 OR2F2O95006 317 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 GZMHP20718 246 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 BAK1Q16611 211 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 TEX30Q5JUR7 227 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 ARRDC1Q8N5I2 433 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 DIRC2Q96SL1 478 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 WNT5BQ9H1J7 359 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 OR2D2Q9H210 308 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms