RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 ZBTB49Q6ZSB9 765 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 OR2W3Q7Z3T1 314 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 RTN4RL2Q86UN3 420 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 OR10H4Q8NGA5 316 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 OR10AC1Q8NH08 325 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 OR56B4Q8NH76 319 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 ZNF596Q8TC21 504 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 CORO2AQ92828 525 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 UTP4Q969X6 686 aaKnown RBP6.4□□□□□ -1.38
VIM-202ENST00000421459 AKR1E2Q96JD6 320 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 PRR25Q96S07 402 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 ADI1Q9BV57 179 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 SEBOXQ9HB31 216 aaPredicted RBP6.4□□□□□ -1.38
VIM-202ENST00000421459 EXOSC4Q9NPD3 245 aaKnown RBP6.4□□□□□ -1.38
VIM-202ENST00000421459 GAR1Q9NY12 217 aaKnown RBP6.4□□□□□ -1.38
VIM-202ENST00000421459 GNG8Q9UK08 70 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 TCRBV3S1A0A5B6 114 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 ODAMA1E959 279 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 FAM90A18PA6NE21 464 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 FAM90A16PA6NEW6 464 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 FAM90A20PA6NIJ5 464 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 FAM90A9PA6NNJ1 464 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 FAM90A12PA8MX19 464 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 FAM90A5PA8MXJ8 464 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 ANKRD65E5RJM6 399 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 HSPB6O14558 160 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 SH2D1BO14796 132 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 SERPINA3P01011 423 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 FAM90A15PP0C7V4 464 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 FAM90A13PP0C7W8 464 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 FAM90A14PP0C7W9 464 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 FAM90A24PP0C7X0 464 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 ZNF44P15621 663 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 CD34P28906 385 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 PTGFRP43088 359 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 GNG10P50151 68 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 NANOS3P60323 173 aaKnown RBP6.39□□□□□ -1.39
VIM-202ENST00000421459 ZNF85Q03923 595 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 FLOT2Q14254 428 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 HES1Q14469 280 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 DEFB136Q30KP8 78 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 KRBOX4Q5JUW0 171 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 OR52W1Q6IF63 320 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 FAM53AQ6NSI3 398 aaPredicted RBP6.39□□□□□ -1.39
VIM-202ENST00000421459 ENTHD1Q8IYW4 607 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 DRAM1Q8N682 238 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 C5orf56Q8N8D9 126 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 KLHL30-AS1Q8NEE0 82 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 OR51A4Q8NGJ6 313 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 RFESDQ8TAC1 157 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 RAX2Q96IS3 184 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 P2RX4Q99571 388 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 MNTQ99583 582 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 GAL3ST2Q9H3Q3 398 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 KRT84Q9NSB2 600 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 TAS2R3Q9NYW6 316 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 FRRS1LQ9P0K9 344 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 ZNF581Q9P0T4 197 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 MOB4Q9Y3A3 225 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 RRP15Q9Y3B9 282 aaKnown RBP6.39□□□□□ -1.39
VIM-202ENST00000421459 HSPE1-MOB4S4R3N1 261 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 LYSTQ99698 3801 aa6.39□□□□□ -1.39
VIM-202ENST00000421459 IGHV3-72A0A0B4J1Y9 119 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 A0A1W2PPI3 338 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 SERPINE3A8MV23 424 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 H0YHG0 523 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 SLC33A1O00400 549 aaPredicted RBP6.38□□□□□ -1.39
VIM-202ENST00000421459 DEGS1O15121 323 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 KDM4BO94953 1096 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 CYB5AP00167 134 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 RPLP1P05386 114 aaKnown RBP6.38□□□□□ -1.39
VIM-202ENST00000421459 OR2T7P0C7T2 308 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 FAM106CPP0CH98 169 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 CGB3P0DN86 165 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 CGB7P0DN87 165 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 TMEM11P17152 192 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 LMO1P25800 156 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 HTR1FP30939 366 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 MYCNOSP40205 109 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 PRRX1P54821 245 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 ISL1P61371 349 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 DGCR2P98153 550 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 CDK5R1Q15078 307 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 SPIN3Q5JUX0 258 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 AMIGO2Q86SJ2 522 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 Q8IYB0 196 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 DNAAF1Q8NEP3 725 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 OR4D6Q8NGJ1 314 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 OR13A1Q8NGR1 328 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 OR13C9Q8NGT0 318 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 OR2G2Q8NGZ5 317 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 PP6455Q8WZ26 134 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 DPF1Q92782 380 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 TOMM40LQ969M1 308 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 EME1Q96AY2 570 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 KIRREL1Q96J84 757 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 HRASLS5Q96KN8 279 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 NR1H4Q96RI1 486 aaPredicted RBP6.38□□□□□ -1.39
VIM-202ENST00000421459 NEK6Q9HC98 313 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 GLS2Q9UI32 602 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms