RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 SPATA19Q7Z5L4 167 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 TMED4Q7Z7H5 227 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 TMEM183AQ8IXX5 376 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 ZDHHC22Q8N966 263 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 SLC30A7Q8NEW0 376 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 OR4S2Q8NH73 311 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 SPPL2AQ8TCT8 520 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 NUDCD2Q8WVJ2 157 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 RAB1CQ92928 201 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 FBXO17Q96EF6 278 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 MMABQ96EY8 250 aaPredicted RBP4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 AKR1E2Q96JD6 320 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 JSRP1Q96MG2 331 aaPredicted RBP4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 PRAP1Q96NZ9 151 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 GPR78Q96P69 363 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 OR4K3Q96R72 315 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 FCRL5Q96RD9 977 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 ATG101Q9BSB4 218 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 PIMREGQ9BSJ6 248 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 FAAP24Q9BTP7 215 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 PRO1933Q9H354 126 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 ACTR8Q9H981 624 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 CALHM2Q9HA72 323 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 NMRAL1Q9HBL8 299 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 SEMA4BQ9NPR2 832 aaPredicted RBP4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 SLC52A3Q9NQ40 469 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 TAS2R5Q9NYW4 299 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 MRPL27Q9P0M9 148 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 COMMD3Q9UBI1 195 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 SLC25A10Q9UBX3 287 aaPredicted RBP4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 B3GALT5Q9Y2C3 310 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 RNF115Q9Y4L5 304 aa4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 TBL2Q9Y4P3 447 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-206ENST00000417628 ZNF407Q9C0G0 2248 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 LOC105371242A0A075B767 164 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 IGHV4-61A0A0C4DH41 118 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 TCRBV5S1A1TA0A578 114 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 FEZF1A0PJY2 475 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 ARRDC5A6NEK1 342 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 FRG2CA6NGY1 282 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 OR5H14A6NHG9 310 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 C17orf100A8MU93 164 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 OR11H12B2RN74 326 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 F8VVB4 439 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 F8VWA3 439 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 PHOX2AO14813 284 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 MGST3O14880 152 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 B4GALT2O60909 372 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 CTSVO60911 334 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 REM1O75628 298 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 METTL18O95568 372 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 SCGB1D1O95968 90 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 ACTL6AO96019 429 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 CST4P01036 141 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 PDYNP01213 254 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 THY1P04216 161 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 OR10J4P0C629 311 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 RFPL3SP0C7P2 107 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 CALCBP10092 127 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 SHC1P29353 583 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 TLX1P31314 330 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 CEACAM3P40198 252 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 AKR1C3P42330 323 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 AVPR1BP47901 424 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 IDH2P48735 452 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 SSR4P51571 173 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 F2RL1P55085 397 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 CDH12P55289 794 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 EFNB1P98172 346 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 PITPNAQ00169 270 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 OR5I1Q13606 314 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 PGGHGQ32M88 737 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 HIKESHIQ53FT3 197 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 EIPR1Q53HC9 387 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 SPANXN3Q5MJ09 141 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 FAM182AQ5T1J6 154 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 CASC10Q5T4H9 136 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 UNQ9370/PRO34162Q6UXP9 181 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 TMEM91Q6ZNR0 172 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 SLC25A26Q70HW3 274 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 MEPCEQ7L2J0 689 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 VTCN1Q7Z7D3 282 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 TUSC5Q8IXB3 177 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 C20orf196Q8IYI0 205 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 GABRG1Q8N1C3 465 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 JAGN1Q8N5M9 183 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 C11orf42Q8N5U0 333 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 STEAP2Q8NFT2 490 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 OR11H1Q8NG94 326 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 OR4S1Q8NGB4 309 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 OR5AP2Q8NGF4 316 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 OR4D6Q8NGJ1 314 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 OR4D5Q8NGN0 318 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 OR11H2Q8NH07 326 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 OR51F2Q8NH61 342 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 SLC7A13Q8TCU3 470 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 CASTOR1Q8WTX7 329 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 PGAM5Q96HS1 289 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 SLC35E1Q96K37 410 aa4.67□□□□□ -1.66
ECHDC1-206ENST00000417628 OR7D2Q96RA2 312 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms