RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 TIAF1O95411 115 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 CYC1P08574 325 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 FUT3P21217 361 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 RBM11P57052 281 aaKnown RBP15.23■□□□□ 0.03
SDCBP-202ENST00000413219 TLE4Q04727 773 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 SRSF7Q16629 238 aaKnown RBP eCLIP15.23■□□□□ 0.03
SDCBP-202ENST00000413219 KHDC3LQ587J8 217 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 ZNF385CQ66K41 422 aaPredicted RBP15.23■□□□□ 0.03
SDCBP-202ENST00000413219 WDR5BQ86VZ2 330 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 SELENOHQ8IZQ5 122 aaKnown RBP15.23■□□□□ 0.03
SDCBP-202ENST00000413219 SLC25A45Q8N413 288 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 TECTBQ96PL2 329 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 PFDN5Q99471 154 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 SLC7A11Q9UPY5 501 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 WSB1Q9Y6I7 421 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 H0YL77 283 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 CXCL1P09341 107 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 MYF5P13349 255 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 CD81P60033 236 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 PRAMEF20Q5VT98 475 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 BRICD5Q6PL45 260 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 Q6ZPA2 131 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 OR5C1Q8NGR4 320 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 CLDND2Q8NHS1 167 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 UCN2Q96RP3 112 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 GLRX2Q9NS18 164 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 DKKL1Q9UK85 242 aa15.23■□□□□ 0.03
SDCBP-202ENST00000413219 TRAV1-1A0A0B4J248 108 aa15.22■□□□□ 0.03
SDCBP-202ENST00000413219 TGOLN2O43493 480 aa15.22■□□□□ 0.03
SDCBP-202ENST00000413219 SSSCA1O60232 199 aa15.22■□□□□ 0.03
SDCBP-202ENST00000413219 LCATP04180 440 aa15.22■□□□□ 0.03
SDCBP-202ENST00000413219 GNRHRP30968 328 aa15.22■□□□□ 0.03
SDCBP-202ENST00000413219 ID3Q02535 119 aa15.22■□□□□ 0.03
SDCBP-202ENST00000413219 AKR1C8PQ5T2L2 129 aa15.22■□□□□ 0.03
SDCBP-202ENST00000413219 CYB561D1Q8N8Q1 229 aa15.22■□□□□ 0.03
SDCBP-202ENST00000413219 OR6C1Q96RD1 312 aa15.22■□□□□ 0.03
SDCBP-202ENST00000413219 RFNGQ9Y644 331 aa15.22■□□□□ 0.03
SDCBP-202ENST00000413219 IGHV3-15A0A0B4J1V0 119 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 OR6C6A6NF89 314 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 HIST1H2BKO60814 126 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 HIST1H2BJP06899 126 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 HIST1H2BOP23527 126 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 HIST1H2BBP33778 126 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 HAAOP46952 286 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 DYNLT3P51808 116 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 DSCR4P56555 118 aaPredicted RBP15.21■□□□□ 0.03
SDCBP-202ENST00000413219 HIST1H2BDP58876 126 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 ERVFRD-1P60508 538 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 HIST1H2BCP62807 126 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 OR8G1Q15617 311 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 HIST2H2BEQ16778 126 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.21■□□□□ 0.03
SDCBP-202ENST00000413219 ZNF343Q6P1L6 599 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 TBC1D26Q86UD7 250 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 HIST1H2BHQ93079 126 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 HIST1H2BNQ99877 126 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 HIST1H2BMQ99879 126 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 SF3B5Q9BWJ5 86 aaKnown RBP15.21■□□□□ 0.03
SDCBP-202ENST00000413219 ZNF442Q9H7R0 627 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 FAM90A10PA6NDY2 464 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 FAM90A18PA6NE21 464 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 FAM90A16PA6NEW6 464 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 FAM90A20PA6NIJ5 464 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 FAM90A8PA6NJQ4 464 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 FAM90A7PA6NKC0 464 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 FAM90A22PA8MWA6 464 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 FAM90A12PA8MX19 464 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 FAM90A5PA8MXJ8 464 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 FAM90A23PA8MXZ1 464 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 ZNF587BE7ETH6 402 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 BCAT2O15382 392 aaPredicted RBP15.21■□□□□ 0.03
SDCBP-202ENST00000413219 FAM90A15PP0C7V4 464 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 FAM90A13PP0C7W8 464 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 FAM90A14PP0C7W9 464 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 FAM90A24PP0C7X0 464 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 OMGP23515 440 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 NOVA1P51513 510 aaKnown RBP15.21■□□□□ 0.03
SDCBP-202ENST00000413219 FOXO1Q12778 655 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 IL24Q13007 206 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 NMSQ5H8A3 153 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 ZNF774Q6NX45 483 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 ODF3L1Q8IXM7 274 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 IL22RA1Q8N6P7 574 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 ZNF383Q8NA42 475 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 SUMF1Q8NBK3 374 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 ZNF837Q96EG3 531 aaPredicted RBP15.21■□□□□ 0.03
SDCBP-202ENST00000413219 RARRES3Q9UL19 164 aa15.21■□□□□ 0.03
SDCBP-202ENST00000413219 UNC13CQ8NB66 2214 aa15.2■□□□□ 0.02
SDCBP-202ENST00000413219 hCG_38984A0A1B0GV85 526 aa15.2■□□□□ 0.02
SDCBP-202ENST00000413219 ADAM20O43506 726 aa15.2■□□□□ 0.02
SDCBP-202ENST00000413219 RGS19P49795 217 aa15.2■□□□□ 0.02
SDCBP-202ENST00000413219 CXorf66Q5JRM2 361 aaPredicted RBP15.2■□□□□ 0.02
SDCBP-202ENST00000413219 Q8NFD4 153 aa15.2■□□□□ 0.02
SDCBP-202ENST00000413219 IL22RA2Q969J5 263 aa15.2■□□□□ 0.02
SDCBP-202ENST00000413219 CPNE4Q96A23 557 aaPredicted RBP15.2■□□□□ 0.02
SDCBP-202ENST00000413219 SIGLEC12Q96PQ1 595 aa15.2■□□□□ 0.02
SDCBP-202ENST00000413219 ASXL3Q9C0F0 2248 aa15.2■□□□□ 0.02
SDCBP-202ENST00000413219 PPP1R2P9O14990 202 aa15.2■□□□□ 0.02
SDCBP-202ENST00000413219 DNPH1O43598 174 aa15.2■□□□□ 0.02
SDCBP-202ENST00000413219 LIFP15018 202 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms