RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 LYG2Q86SG7 212 aa11.96□□□□□ -0.5
LIMS2-206ENST00000409754 C12orf45Q8N5I9 185 aaPredicted RBP11.96□□□□□ -0.5
LIMS2-206ENST00000409754 GTF3AQ92664 365 aaKnown RBP11.96□□□□□ -0.5
LIMS2-206ENST00000409754 NRIP2Q9BQI9 281 aa11.96□□□□□ -0.5
LIMS2-206ENST00000409754 CA10Q9NS85 328 aa11.96□□□□□ -0.5
LIMS2-206ENST00000409754 NECAP2Q9NVZ3 263 aa11.96□□□□□ -0.5
LIMS2-206ENST00000409754 HECTD1Q9ULT8 2610 aa11.96□□□□□ -0.5
LIMS2-206ENST00000409754 DCHS2Q6V1P9 2916 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 MCRIP1C9JLW8 97 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 NOS1APO75052 506 aaPredicted RBP11.95□□□□□ -0.5
LIMS2-206ENST00000409754 OR2A4O95047 310 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 ZNF250P15622 560 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 GLRXP35754 106 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 NPY4RP50391 375 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 MZT1Q08AG7 82 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 MPPED2Q15777 294 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 Q6ZR03 302 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 TMEM185AQ8NFB2 350 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 ZFAND1Q8TCF1 268 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 ITLN2Q8WWU7 325 aaPredicted RBP11.95□□□□□ -0.5
LIMS2-206ENST00000409754 RND1Q92730 232 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 OR2A7Q96R45 310 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 TLNRD1Q9H1K6 362 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 PIPOXQ9P0Z9 390 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 FZR1Q9UM11 496 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 PRR14LQ5THK1 2151 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 ICE1Q9Y2F5 2266 aa11.95□□□□□ -0.5
LIMS2-206ENST00000409754 CDIPTO14735 213 aa11.94□□□□□ -0.5
LIMS2-206ENST00000409754 NAPSAO96009 420 aa11.94□□□□□ -0.5
LIMS2-206ENST00000409754 HLA-AP01891 365 aaKnown RBP11.94□□□□□ -0.5
LIMS2-206ENST00000409754 GRPP07492 148 aa11.94□□□□□ -0.5
LIMS2-206ENST00000409754 OR5H8P0DN80 308 aa11.94□□□□□ -0.5
LIMS2-206ENST00000409754 RAP2BP61225 183 aa11.94□□□□□ -0.5
LIMS2-206ENST00000409754 RPS23P62266 143 aaKnown RBP11.94□□□□□ -0.5
LIMS2-206ENST00000409754 DHODHQ02127 395 aa11.94□□□□□ -0.5
LIMS2-206ENST00000409754 PPP1R1AQ13522 171 aa11.94□□□□□ -0.5
LIMS2-206ENST00000409754 ZNF660Q6AZW8 331 aaPredicted RBP11.94□□□□□ -0.5
LIMS2-206ENST00000409754 ALKBH2Q6NS38 261 aa11.94□□□□□ -0.5
LIMS2-206ENST00000409754 SUMF2Q8NBJ7 301 aa11.94□□□□□ -0.5
LIMS2-206ENST00000409754 ADAD2Q8NCV1 583 aaKnown RBP11.94□□□□□ -0.5
LIMS2-206ENST00000409754 ASB13Q8WXK3 278 aa11.94□□□□□ -0.5
LIMS2-206ENST00000409754 RIMS4Q9H426 269 aaPredicted RBP11.94□□□□□ -0.5
LIMS2-206ENST00000409754 C5orf66Q9H5L9 145 aa11.94□□□□□ -0.5
LIMS2-206ENST00000409754 ASH1LQ9NR48 2969 aaKnown RBP11.94□□□□□ -0.5
LIMS2-206ENST00000409754 C9orf170A2RU37 121 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 FAM221AA4D161 298 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 OR5H14A6NHG9 310 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 IGHV3-13P01766 116 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 GSTT2P0CG29 244 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 DUSP1P28562 367 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 CD34P28906 385 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 CASP6P55212 293 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 RBM39Q14498 530 aaKnown RBP11.93□□□□□ -0.5
LIMS2-206ENST00000409754 MSMPQ1L6U9 139 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 Q6P435 159 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 SLC22A25Q6T423 547 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 DHRS11Q6UWP2 260 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 Q6ZPA2 131 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 C11orf53Q8IXP5 236 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 POC1AQ8NBT0 407 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 OR2T35Q8NGX2 323 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 MITD1Q8WV92 249 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 DHRS9Q9BPW9 319 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 ZNF2Q9BSG1 426 aaPredicted RBP11.93□□□□□ -0.5
LIMS2-206ENST00000409754 CHMP1AQ9HD42 196 aaPredicted RBP11.93□□□□□ -0.5
LIMS2-206ENST00000409754 DECR2Q9NUI1 292 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 TRBV6-6A0A0A6YYG2 114 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 TRAV24A0A0B4J272 114 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 FAM172BPA6NC97 362 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 F5H5P2 479 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 GOSR2O14653 212 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 DEGS1O15121 323 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 AKR1C4P17516 323 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 DNASE1P24855 282 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 CD40P25942 277 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 ZNF146Q15072 292 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 C2orf68Q2NKX9 166 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 TMEM128Q5BJH2 165 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 SPIN3Q5JUX0 258 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 C22orf34Q6ZV56 151 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 UXS1Q8NBZ7 420 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 RTBDNQ9BSG5 229 aaPredicted RBP11.93□□□□□ -0.5
LIMS2-206ENST00000409754 DPCDQ9BVM2 203 aaPredicted RBP11.93□□□□□ -0.5
LIMS2-206ENST00000409754 CHIAQ9BZP6 476 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 HES4Q9HCC6 221 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 MSL2Q9HCI7 577 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 Q9N2K0 584 aa11.93□□□□□ -0.5
LIMS2-206ENST00000409754 HCFC1P51610 2035 aa11.92□□□□□ -0.5
LIMS2-206ENST00000409754 IGLV3-9A0A075B6K5 115 aa11.92□□□□□ -0.5
LIMS2-206ENST00000409754 ATP6V1G2-DDX39BF2Z307 99 aa11.92□□□□□ -0.5
LIMS2-206ENST00000409754 G3V3Q6 166 aa11.92□□□□□ -0.5
LIMS2-206ENST00000409754 SLC22A5O76082 557 aa11.92□□□□□ -0.5
LIMS2-206ENST00000409754 NXPH2O95156 264 aa11.92□□□□□ -0.5
LIMS2-206ENST00000409754 CD200P41217 278 aa11.92□□□□□ -0.5
LIMS2-206ENST00000409754 IL13RA1P78552 427 aa11.92□□□□□ -0.5
LIMS2-206ENST00000409754 LPCAT3Q6P1A2 487 aa11.92□□□□□ -0.5
LIMS2-206ENST00000409754 FIP1L1Q6UN15 594 aaKnown RBP11.92□□□□□ -0.5
LIMS2-206ENST00000409754 NEK7Q8TDX7 302 aa11.92□□□□□ -0.5
LIMS2-206ENST00000409754 TMEM171Q8WVE6 324 aa11.92□□□□□ -0.5
LIMS2-206ENST00000409754 TMEM230Q96A57 120 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms