RNA–Protein interactions for RNA: ENST00000400777.7

CASP9-204, Transcript of caspase 9, humanhuman

TSL 1 (best)

Gene CASP9, Length 1,878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-204ENST00000400777 DYRK2Q92630 601 aa13.5□□□□□ -0.25
CASP9-204ENST00000400777 CMSS1Q9BQ75 279 aaKnown RBP13.5□□□□□ -0.25
CASP9-204ENST00000400777 TRAV38-1A0A0B4J264 116 aa13.5□□□□□ -0.25
CASP9-204ENST00000400777 LINC00854A0A1B0GVQ3 168 aa13.5□□□□□ -0.25
CASP9-204ENST00000400777 SSX5O60225 188 aa13.5□□□□□ -0.25
CASP9-204ENST00000400777 CA11O75493 328 aa13.5□□□□□ -0.25
CASP9-204ENST00000400777 GLAP06280 429 aa13.5□□□□□ -0.25
CASP9-204ENST00000400777 FCER2P06734 321 aa13.5□□□□□ -0.25
CASP9-204ENST00000400777 ACTBP60709 375 aa13.5□□□□□ -0.25
CASP9-204ENST00000400777 ACTG1P63261 375 aa13.5□□□□□ -0.25
CASP9-204ENST00000400777 MRPS11P82912 194 aaKnown RBP13.5□□□□□ -0.25
CASP9-204ENST00000400777 COL10A1Q03692 680 aa13.5□□□□□ -0.25
CASP9-204ENST00000400777 TOMM5Q8N4H5 51 aa13.5□□□□□ -0.25
CASP9-204ENST00000400777 CD177Q8N6Q3 437 aa13.5□□□□□ -0.25
CASP9-204ENST00000400777 DYSFO75923 2080 aa13.5□□□□□ -0.25
CASP9-204ENST00000400777 LGALS8O00214 317 aa13.49□□□□□ -0.25
CASP9-204ENST00000400777 PSPNO60542 156 aa13.49□□□□□ -0.25
CASP9-204ENST00000400777 NDUFS7O75251 213 aa13.49□□□□□ -0.25
CASP9-204ENST00000400777 F12P00748 615 aaPredicted RBP13.49□□□□□ -0.25
CASP9-204ENST00000400777 STUMQ69YW2 141 aa13.49□□□□□ -0.25
CASP9-204ENST00000400777 ASCC1Q8N9N2 400 aaKnown RBP13.49□□□□□ -0.25
CASP9-204ENST00000400777 IGFBPL1Q8WX77 278 aa13.49□□□□□ -0.25
CASP9-204ENST00000400777 HDHD3Q9BSH5 251 aaPredicted RBP13.49□□□□□ -0.25
CASP9-204ENST00000400777 CHST6Q9GZX3 395 aa13.49□□□□□ -0.25
CASP9-204ENST00000400777 PPA2Q9H2U2 334 aa13.49□□□□□ -0.25
CASP9-204ENST00000400777 C12orf4Q9NQ89 552 aa13.49□□□□□ -0.25
CASP9-204ENST00000400777 ETAA1Q9NY74 926 aa13.49□□□□□ -0.25
CASP9-204ENST00000400777 METRNQ9UJH8 293 aa13.49□□□□□ -0.25
CASP9-204ENST00000400777 ZNF222Q9UK12 451 aa13.49□□□□□ -0.25
CASP9-204ENST00000400777 DOPEY2Q9Y3R5 2298 aa13.49□□□□□ -0.25
CASP9-204ENST00000400777 NBPF19A0A087WUL8 3843 aa13.49□□□□□ -0.25
CASP9-204ENST00000400777 RP2O75695 350 aa13.48□□□□□ -0.25
CASP9-204ENST00000400777 GYPAP02724 150 aa13.48□□□□□ -0.25
CASP9-204ENST00000400777 EFNA4P52798 201 aa13.48□□□□□ -0.25
CASP9-204ENST00000400777 SSBP1Q04837 148 aaKnown RBP13.48□□□□□ -0.25
CASP9-204ENST00000400777 PEG10Q86TG7 708 aaKnown RBP13.48□□□□□ -0.25
CASP9-204ENST00000400777 GVQW1Q8N7I0 195 aa13.48□□□□□ -0.25
CASP9-204ENST00000400777 SEBOXQ9HB31 216 aaPredicted RBP13.48□□□□□ -0.25
CASP9-204ENST00000400777 IFT46Q9NQC8 304 aa13.48□□□□□ -0.25
CASP9-204ENST00000400777 ZNF701Q9NV72 531 aaPredicted RBP13.48□□□□□ -0.25
CASP9-204ENST00000400777 TAS2R8Q9NYW2 309 aa13.48□□□□□ -0.25
CASP9-204ENST00000400777 USF3Q68DE3 2245 aa13.48□□□□□ -0.25
CASP9-204ENST00000400777 FBN2P35556 2912 aa13.48□□□□□ -0.25
CASP9-204ENST00000400777 ISPDA4D126 451 aa13.48□□□□□ -0.25
CASP9-204ENST00000400777 ECDO95905 644 aaPredicted RBP13.48□□□□□ -0.25
CASP9-204ENST00000400777 GSTT2BP0CG30 244 aa13.48□□□□□ -0.25
CASP9-204ENST00000400777 CBX5P45973 191 aa13.48□□□□□ -0.25
CASP9-204ENST00000400777 AP3S2P59780 193 aa13.48□□□□□ -0.25
CASP9-204ENST00000400777 BTG1P62324 171 aa13.48□□□□□ -0.25
CASP9-204ENST00000400777 ATXN7L3Q14CW9 347 aaPredicted RBP13.48□□□□□ -0.25
CASP9-204ENST00000400777 OCSTAMPQ9BR26 566 aa13.48□□□□□ -0.25
CASP9-204ENST00000400777 ST6GALNAC5Q9BVH7 336 aa13.48□□□□□ -0.25
CASP9-204ENST00000400777 LIME1Q9H400 295 aa13.48□□□□□ -0.25
CASP9-204ENST00000400777 ZNF230Q9UIE0 474 aaPredicted RBP13.48□□□□□ -0.25
CASP9-204ENST00000400777 DSCAMO60469 2012 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 FASNP49327 2511 aaKnown RBP13.47□□□□□ -0.25
CASP9-204ENST00000400777 TMEM82A0PJX8 343 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 TMPRSS2O15393 492 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 ZNF737O75373 536 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 CSF1P09603 554 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 SSTR2P30874 369 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 MDH2P40926 338 aaKnown RBP13.47□□□□□ -0.25
CASP9-204ENST00000400777 DEFA1P59665 94 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 DEFA3P59666 94 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 ZMYND11Q15326 602 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 ZNF787Q6DD87 383 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 C17orf107Q6ZR85 190 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 ZNF561Q8N587 486 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 ZNRF1Q8ND25 227 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 MARVELD3Q96A59 401 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 TMEM165Q9HC07 324 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 CHMP1AQ9HD42 196 aaPredicted RBP13.47□□□□□ -0.25
CASP9-204ENST00000400777 ING3Q9NXR8 418 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 TBC1D24Q9ULP9 559 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 MAB21L2Q9Y586 359 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 CSMD2Q7Z408 3487 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 SPG11Q96JI7 2443 aa13.47□□□□□ -0.25
CASP9-204ENST00000400777 ANKRD20A5PA0PJZ0 165 aa13.46□□□□□ -0.25
CASP9-204ENST00000400777 AMY2BP19961 511 aa13.46□□□□□ -0.25
CASP9-204ENST00000400777 RCVRNP35243 200 aa13.46□□□□□ -0.25
CASP9-204ENST00000400777 KCNJ8Q15842 424 aa13.46□□□□□ -0.25
CASP9-204ENST00000400777 SHEQ5VZ18 495 aa13.46□□□□□ -0.25
CASP9-204ENST00000400777 POC5Q8NA72 575 aa13.46□□□□□ -0.25
CASP9-204ENST00000400777 PPP1R35Q8TAP8 253 aa13.46□□□□□ -0.25
CASP9-204ENST00000400777 SDSLQ96GA7 329 aa13.46□□□□□ -0.25
CASP9-204ENST00000400777 COX4I2Q96KJ9 171 aa13.46□□□□□ -0.25
CASP9-204ENST00000400777 CCL13Q99616 98 aa13.46□□□□□ -0.25
CASP9-204ENST00000400777 SHARPINQ9H0F6 387 aa13.46□□□□□ -0.25
CASP9-204ENST00000400777 ZNF665Q9H7R5 613 aa13.46□□□□□ -0.25
CASP9-204ENST00000400777 CHODLQ9H9P2 273 aa13.46□□□□□ -0.25
CASP9-204ENST00000400777 FCGR3AP08637 254 aa13.46□□□□□ -0.26
CASP9-204ENST00000400777 DTYMKP23919 212 aa13.46□□□□□ -0.26
CASP9-204ENST00000400777 HLA-DMAP28067 261 aa13.46□□□□□ -0.26
CASP9-204ENST00000400777 OR3A1P47881 315 aa13.46□□□□□ -0.26
CASP9-204ENST00000400777 KCNJ3P48549 501 aa13.46□□□□□ -0.26
CASP9-204ENST00000400777 KLF9Q13886 244 aaPredicted RBP13.46□□□□□ -0.26
CASP9-204ENST00000400777 GRK1Q15835 563 aa13.46□□□□□ -0.26
CASP9-204ENST00000400777 CARTPTQ16568 116 aa13.46□□□□□ -0.26
CASP9-204ENST00000400777 ATPAF1Q5TC12 328 aaPredicted RBP13.46□□□□□ -0.26
CASP9-204ENST00000400777 OR52W1Q6IF63 320 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms