RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 LOC390937A0A1W2PQ73 354 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 SSSCA1O60232 199 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 CTSDP07339 412 aaPredicted RBP12.13□□□□□ -0.47
SCAF4-202ENST00000399804 COX5BP10606 129 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 TDGF1P13385 188 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 NAT1P18440 290 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 FOXO1Q12778 655 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 CPEB3Q8NE35 698 aaKnown RBP12.13□□□□□ -0.47
SCAF4-202ENST00000399804 OR10V1Q8NGI7 309 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 FAM213BQ8TBF2 198 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 WDYHV1Q96HA8 205 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 C5orf42Q9H799 3197 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 E5RGE8 158 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 GPR12P47775 334 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 OR3A1P47881 315 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 NPBWR2P48146 333 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 FOXG1P55316 489 aaPredicted RBP12.13□□□□□ -0.47
SCAF4-202ENST00000399804 SURF2Q15527 256 aaPredicted RBP12.13□□□□□ -0.47
SCAF4-202ENST00000399804 LGALSLQ3ZCW2 172 aaPredicted RBP12.13□□□□□ -0.47
SCAF4-202ENST00000399804 GGNBP1Q5YKI7 109 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 SSX9Q7RTT3 188 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 C1orf87Q8N0U7 546 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 SCCPDHQ8NBX0 429 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 BOD1Q96IK1 185 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 NPDC1Q9NQX5 325 aaPredicted RBP12.13□□□□□ -0.47
SCAF4-202ENST00000399804 MLXQ9UH92 298 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 FOXD3Q9UJU5 478 aaPredicted RBP12.13□□□□□ -0.47
SCAF4-202ENST00000399804 NSG2Q9Y328 171 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 PPYP01298 95 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 IFNA4P05014 189 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 FGFBP3Q8TAT2 258 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 MITD1Q8WV92 249 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 ZNF75AQ96N20 296 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 PARD6AQ9NPB6 346 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 FCGR3AP08637 254 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 ZBTB25P24278 435 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 GFRA1P56159 465 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 VAX1Q5SQQ9 334 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 C1orf185Q5T7R7 199 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 PRAMEF6Q5VXH4 476 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 H2BFWTQ7Z2G1 175 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 FAM219AQ8IW50 185 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 MRGPRDQ8TDS7 321 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 ABHD5Q8WTS1 349 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 FER1L5A0AVI2 2057 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 DEFB108AA8MXU0 73 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 TNFAIP6P98066 277 aaPredicted RBP12.12□□□□□ -0.47
SCAF4-202ENST00000399804 ZNF266Q14584 549 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 DCAF12L2Q5VW00 463 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 VWA1Q6PCB0 445 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 RND1Q92730 232 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 RBPMSQ93062 196 aaKnown RBP12.12□□□□□ -0.47
SCAF4-202ENST00000399804 TREM2Q9NZC2 230 aa12.12□□□□□ -0.47
SCAF4-202ENST00000399804 IGKV1-9A0A0C4DH69 117 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 H3BP45 60 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 TNFRSF1AP19438 455 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 KRTCAP3Q53RY4 240 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 KRBOX4Q5JUW0 171 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 OR8G2PQ6IF36 304 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 MOB1BQ7L9L4 216 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 SUMF2Q8NBJ7 301 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 OR4A16Q8NH70 328 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 LIN7CQ9NUP9 197 aaKnown RBP12.11□□□□□ -0.47
SCAF4-202ENST00000399804 hCG_38984A0A1B0GV85 526 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 TRDCB7Z8K6 153 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 JTBO76095 146 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 IFNA10P01566 189 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 NUBP1P53384 320 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 FGF12P61328 243 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 HBG1P69891 147 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 HBG2P69892 147 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 PLAC9Q5JTB6 97 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 KCNRGQ8N5I3 272 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 Q96M66 194 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 PLEKHA2Q9HB19 425 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 SLC2A9Q9NRM0 540 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 V9GYS6 101 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 C3orf85A0A1B0GTC6 90 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 BCL2L11O43521 198 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 B3GALT5-AS1P59052 145 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 DHODHQ02127 395 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 Q6ZT83 130 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 EDARADDQ8WWZ3 215 aa12.11□□□□□ -0.47
SCAF4-202ENST00000399804 HEYLQ9NQ87 328 aaPredicted RBP12.11□□□□□ -0.47
SCAF4-202ENST00000399804 C16orf97H3BN30 126 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 RPL36A-HNRNPH2H7BZ11 118 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 KRASP01116 189 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 IGHV3-13P01766 116 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 IGHV3-7P01780 117 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 AKR1C1Q04828 323 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 SPANXN5Q5MJ07 72 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 PROK2Q9HC23 129 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 SDHAF2Q9NX18 166 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 HEATR1Q9H583 2144 aaKnown RBP12.1□□□□□ -0.47
SCAF4-202ENST00000399804 MUC22E2RYF6 1773 aaPredicted RBP12.1□□□□□ -0.47
SCAF4-202ENST00000399804 CACNA1BQ00975 2339 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 IGHV3-43A0A0B4J1X8 118 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 HMSDA8MTL9 139 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 HAND1O96004 215 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 IGHV3-43DP0DP04 118 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms