RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SLC36A1Q7Z2H8 476 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 MOGAT3Q86VF5 341 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 UXS1Q8NBZ7 420 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 OR52B4Q8NGK2 314 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 TERB2Q8NHR7 220 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 MARCH1Q8TCQ1 289 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 ITLN1Q8WWA0 313 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 CAPSLQ8WWF8 208 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 ST6GAL2Q96JF0 529 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 MEGF10Q96KG7 1140 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 TLNRD1Q9H1K6 362 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 NECAP2Q9NVZ3 263 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 ZNF222Q9UK12 451 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 VSIG4Q9Y279 399 aa7.31□□□□□ -1.24
TDP1-203ENST00000393454 TUBAL3A6NHL2 446 aa7.3□□□□□ -1.24
TDP1-203ENST00000393454 HAND1O96004 215 aa7.3□□□□□ -1.24
TDP1-203ENST00000393454 UQCRFS1P47985 274 aa7.3□□□□□ -1.24
TDP1-203ENST00000393454 CEBPDP49716 269 aaPredicted RBP7.3□□□□□ -1.24
TDP1-203ENST00000393454 MECP2P51608 486 aaKnown RBP7.3□□□□□ -1.24
TDP1-203ENST00000393454 GRK1Q15835 563 aa7.3□□□□□ -1.24
TDP1-203ENST00000393454 ADIPOQQ15848 244 aa7.3□□□□□ -1.24
TDP1-203ENST00000393454 SPRNQ5BIV9 151 aa7.3□□□□□ -1.24
TDP1-203ENST00000393454 SPIN3Q5JUX0 258 aa7.3□□□□□ -1.24
TDP1-203ENST00000393454 CD276Q5ZPR3 534 aa7.3□□□□□ -1.24
TDP1-203ENST00000393454 ACP7Q6ZNF0 438 aa7.3□□□□□ -1.24
TDP1-203ENST00000393454 OVCH2Q7RTZ1 564 aa7.3□□□□□ -1.24
TDP1-203ENST00000393454 ZDHHC22Q8N966 263 aa7.3□□□□□ -1.24
TDP1-203ENST00000393454 MED30Q96HR3 178 aa7.3□□□□□ -1.24
TDP1-203ENST00000393454 FYTTD1Q96QD9 318 aaKnown RBP7.3□□□□□ -1.24
TDP1-203ENST00000393454 FN3KRPQ9HA64 309 aa7.3□□□□□ -1.24
TDP1-203ENST00000393454 ROS1P08922 2347 aa7.3□□□□□ -1.24
TDP1-203ENST00000393454 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.29□□□□□ -1.24
TDP1-203ENST00000393454 SNRPGP15A8MWD9 76 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 SLC33A1O00400 549 aaPredicted RBP7.29□□□□□ -1.24
TDP1-203ENST00000393454 IGHV1-46P01743 117 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 GLAP06280 429 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 GSTT2P0CG29 244 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 OR5H8P0DN80 308 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 PGAM2P15259 253 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 AKR1C4P17516 323 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 SERPINF1P36955 418 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 ZNF146Q15072 292 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 SMIM21Q3B7S5 101 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 OR11H7Q8NGC8 314 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 OR5T2Q8NGG2 359 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 NEUROG1Q92886 237 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 MRGPRFQ96AM1 343 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 SCGB3A2Q96PL1 93 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 ZNF2Q9BSG1 426 aaPredicted RBP7.29□□□□□ -1.24
TDP1-203ENST00000393454 RIMS4Q9H426 269 aaPredicted RBP7.29□□□□□ -1.24
TDP1-203ENST00000393454 IFT22Q9H7X7 185 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 HES4Q9HCC6 221 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 DNAJB11Q9UBS4 358 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 ZDHHC8Q9ULC8 765 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 KALRNO60229 2985 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 RFPL4AA6NLU0 287 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 SHISA9B4DS77 424 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 RFPL4AL1F8VTS6 287 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 ZNF205O95201 554 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 PTBP3O95758 552 aaKnown RBP7.29□□□□□ -1.24
TDP1-203ENST00000393454 NAPSAO96009 420 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 TFF1P04155 84 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 OR4E1P0C645 316 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 SORDQ00796 357 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 TLE1Q04724 770 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 BAMBIQ13145 260 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 ZFP69Q49AA0 526 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 C4orf17Q53FE4 359 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 ZNF626Q68DY1 528 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 Q6ZPA2 131 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 MUC20Q8N307 709 aaPredicted RBP7.29□□□□□ -1.24
TDP1-203ENST00000393454 ADAD2Q8NCV1 583 aaKnown RBP7.29□□□□□ -1.24
TDP1-203ENST00000393454 GALNT11Q8NCW6 608 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 MRPL30Q8TCC3 161 aaKnown RBP7.29□□□□□ -1.24
TDP1-203ENST00000393454 TMPRSS13Q9BYE2 586 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 Q9N2K0 584 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 TREM2Q9NZC2 230 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 IL19Q9UHD0 177 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 IGSF10Q6WRI0 2623 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 CACNA1BQ00975 2339 aa7.29□□□□□ -1.24
TDP1-203ENST00000393454 IGHV3OR15-7A0A075B7D8 119 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 OR5H14A6NHG9 310 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 E7EQL1 145 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 KNG1P01042 644 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 EGR1P18146 543 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 CXCL3P19876 107 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 MDH2P40926 338 aaKnown RBP7.28□□□□□ -1.24
TDP1-203ENST00000393454 GLP1RP43220 463 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 NKX2-5P52952 324 aaPredicted RBP7.28□□□□□ -1.24
TDP1-203ENST00000393454 UBE2MP61081 183 aaKnown RBP7.28□□□□□ -1.24
TDP1-203ENST00000393454 SEC61A1P61619 476 aaKnown RBP7.28□□□□□ -1.24
TDP1-203ENST00000393454 ATXN7L3Q14CW9 347 aaPredicted RBP7.28□□□□□ -1.24
TDP1-203ENST00000393454 BEX5Q5H9J7 111 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 C5orf24Q7Z6I8 188 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 SLC25A42Q86VD7 318 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 DMRTC2Q8IXT2 367 aaPredicted RBP7.28□□□□□ -1.24
TDP1-203ENST00000393454 OR10Z1Q8NGY1 313 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 ZNF431Q8TF32 576 aaPredicted RBP7.28□□□□□ -1.24
TDP1-203ENST00000393454 ALX4Q9H161 411 aaPredicted RBP7.28□□□□□ -1.24
TDP1-203ENST00000393454 TMEM165Q9HC07 324 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms