RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 GMPPAQ96IJ6 420 aaPredicted RBP13.1□□□□□ -0.31
SNPH-202ENST00000381873 PECRQ9BY49 303 aa13.1□□□□□ -0.31
SNPH-202ENST00000381873 FRRS1LQ9P0K9 344 aa13.1□□□□□ -0.31
SNPH-202ENST00000381873 TMEM267Q0VDI3 215 aaPredicted RBP13.1□□□□□ -0.31
SNPH-202ENST00000381873 OR52L2PQ8NGH6 319 aa13.1□□□□□ -0.31
SNPH-202ENST00000381873 TMEM38BQ9NVV0 291 aa13.1□□□□□ -0.31
SNPH-202ENST00000381873 OPN1MWP04001 364 aa13.1□□□□□ -0.31
SNPH-202ENST00000381873 OPN1MW2P0DN77 364 aa13.1□□□□□ -0.31
SNPH-202ENST00000381873 OPN1MW3P0DN78 364 aa13.1□□□□□ -0.31
SNPH-202ENST00000381873 MMP16P51512 607 aa13.1□□□□□ -0.31
SNPH-202ENST00000381873 OR1L4Q8NGR5 311 aa13.1□□□□□ -0.31
SNPH-202ENST00000381873 OR1A1Q9P1Q5 309 aa13.1□□□□□ -0.31
SNPH-202ENST00000381873 CCL21O00585 134 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 WDR61Q9GZS3 305 aaKnown RBP13.09□□□□□ -0.31
SNPH-202ENST00000381873 RAB33BQ9H082 229 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 MRPL22Q9NWU5 206 aaKnown RBP13.09□□□□□ -0.31
SNPH-202ENST00000381873 DOCK3Q8IZD9 2030 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 LRRC37A2A6NM11 1700 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 HSBP1O75506 76 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 FOSL1P15407 271 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 IL13RA2Q14627 380 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 ST3GAL2Q16842 350 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 RNF133Q8WVZ7 376 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 WSB1Q9Y6I7 421 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 FAM24AA6NFZ4 105 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 TRDCB7Z8K6 153 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 PRSS44E7EML9 344 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 BGLAPP02818 100 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 SPNP16150 400 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 SURF2Q15527 256 aaPredicted RBP13.09□□□□□ -0.31
SNPH-202ENST00000381873 GUK1Q16774 197 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 C4orf17Q53FE4 359 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 HIKESHIQ53FT3 197 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 OR5A2Q8NGI9 324 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 NIT2Q9NQR4 276 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 GOLT1BQ9Y3E0 138 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 OTOFQ9HC10 1997 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 MPC2O95563 127 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 CTSDP07339 412 aaPredicted RBP13.09□□□□□ -0.31
SNPH-202ENST00000381873 SPINK2P20155 84 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 RHOBP62745 196 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 ZNF528Q3MIS6 628 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 ZNF441Q8N8Z8 693 aa13.09□□□□□ -0.31
SNPH-202ENST00000381873 CA11O75493 328 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 HAND1O96004 215 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 MPV17LQ2QL34 196 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 MIDNQ504T8 468 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 ZNF721Q8TF20 911 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 TMEM208Q9BTX3 173 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 SPTBN1Q01082 2364 aaKnown RBP13.08□□□□□ -0.32
SNPH-202ENST00000381873 OOEPA6NGQ2 149 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 F2RL2O00254 374 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 SOX15O60248 233 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 IFI6P09912 130 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 TNXAQ16473 311 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 ATP6V1FQ16864 119 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 TMEM65Q6PI78 240 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 SSX8Q7RTT4 187 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 SLC25A40Q8TBP6 338 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 C2CD4CQ8TF44 421 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 NEURL2Q9BR09 285 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 YTHDF2Q9Y5A9 579 aaKnown RBP13.08□□□□□ -0.32
SNPH-202ENST00000381873 MAP1LC3B2A6NCE7 125 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 SLC25A5P05141 298 aaKnown RBP13.08□□□□□ -0.32
SNPH-202ENST00000381873 TMEM171Q8WVE6 324 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 MAP1LC3BQ9GZQ8 125 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 PLSCR3Q9NRY6 295 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 CA10Q9NS85 328 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 DTX4Q9Y2E6 619 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 ANKRD20A5PA0PJZ0 165 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 RNASEK-C17orf49H0YIS7 233 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 GEMIN2O14893 280 aaKnown RBP13.08□□□□□ -0.32
SNPH-202ENST00000381873 SOCS1O15524 211 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 FTH1P19P0C7X4 201 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 LGALS7P47929 136 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.08□□□□□ -0.32
SNPH-202ENST00000381873 TMEM18Q96B42 140 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 RBM38Q9H0Z9 239 aaKnown RBP13.08□□□□□ -0.32
SNPH-202ENST00000381873 UBTD1Q9HAC8 227 aa13.08□□□□□ -0.32
SNPH-202ENST00000381873 ZNF205O95201 554 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 ERGP11308 486 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 ZBTB37Q5TC79 503 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 PRSS54Q6PEW0 395 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 TGIF2LYQ8IUE0 185 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 TGIF2LXQ8IUE1 241 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 ZNF665Q9H7R5 613 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 A0A0J9YW62 118 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 DNASE2O00115 360 aaPredicted RBP13.07□□□□□ -0.32
SNPH-202ENST00000381873 VDAC1P21796 283 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 SLC6A1P30531 599 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 DHRS7BQ6IAN0 325 aaPredicted RBP13.07□□□□□ -0.32
SNPH-202ENST00000381873 TEX261Q6UWH6 196 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 TTTY12Q9BZ98 90 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 TREM2Q9NZC2 230 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 CLN8Q9UBY8 286 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 U3KQ87 197 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 NTN1O95631 604 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 TSPO2Q5TGU0 170 aa13.07□□□□□ -0.32
SNPH-202ENST00000381873 C8orf82Q6P1X6 216 aaPredicted RBP13.07□□□□□ -0.32
SNPH-202ENST00000381873 CRIPAKQ8N1N5 446 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms