RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 COX7A1P24310 79 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 KLF9Q13886 244 aaPredicted RBP14.12□□□□□ -0.15
COL2A1-202ENST00000380518 STRCQ7RTU9 1775 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 TRAV38-1A0A0B4J264 116 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 OOEPA6NGQ2 149 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 KIAA1324LA8MWY0 1029 aaPredicted RBP14.12□□□□□ -0.15
COL2A1-202ENST00000380518 OPN1MWP04001 364 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 OPN1MW2P0DN77 364 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 OPN1MW3P0DN78 364 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 RPS4Y1P22090 263 aaKnown RBP14.12□□□□□ -0.15
COL2A1-202ENST00000380518 LSM11P83369 360 aaKnown RBP eCLIP14.12□□□□□ -0.158e-7■■□□□ 14.5
COL2A1-202ENST00000380518 FOXO1Q12778 655 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 RNASEKQ6P5S7 137 aaKnown RBP14.12□□□□□ -0.15
COL2A1-202ENST00000380518 CA5BP1Q8WTZ4 195 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 R3HDM4Q96D70 268 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 RNF2Q99496 336 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 NTMQ9P121 344 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 A0A1W2PNV4 684 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 J3QT63 122 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 CHST1O43916 411 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 SPINK4O60575 86 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 BSXQ3C1V8 233 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 OR2H1Q9GZK4 316 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 IFT22Q9H7X7 185 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 FAM186AA6NE01 2351 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 TMEM218A2RU14 115 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 C21orf140B9A014 251 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 GZMHP20718 246 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 AMTP48728 403 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 FGF8P55075 233 aaPredicted RBP14.11□□□□□ -0.15
COL2A1-202ENST00000380518 SLC26A10Q8NG04 563 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 RAB1CQ92928 201 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 SMOC1Q9H4F8 434 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 FAM90A27PA6NNH2 459 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 SP1P08047 785 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 VSIG8P0DPA2 414 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 WDR73Q6P4I2 378 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 C9orf62Q8N4C0 152 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 MS4A10Q96PG2 267 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 GPA33Q99795 319 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 TMEM167BQ9NRX6 74 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 CDIPTO14735 213 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 CA11O75493 328 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 CDS2O95674 445 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 CCL3P10147 92 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 GTF2H5Q6ZYL4 71 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 GAPTQ8N292 157 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 MANBALQ9NQG1 85 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 SLC2A9Q9NRM0 540 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 ABCA3Q99758 1704 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 TCAPO15273 167 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 STPG2Q8N412 459 aa14.11□□□□□ -0.15
COL2A1-202ENST00000380518 OR2M7Q8NG81 312 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 BLNKQ8WV28 456 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 GPR35Q9HC97 309 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 CA10Q9NS85 328 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 NAT8Q9UHE5 227 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 FOXS1O43638 330 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 HAND1O96004 215 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 IGHV3-13P01766 116 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 IGHV3-7P01780 117 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 CCKARP32238 428 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 UBE2L3P68036 154 aaKnown RBP14.1□□□□□ -0.15
COL2A1-202ENST00000380518 ZNF79Q15937 498 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 RPEL1Q2QD12 228 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 ZNF260Q3ZCT1 412 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 TIPARPQ7Z3E1 657 aaKnown RBP14.1□□□□□ -0.15
COL2A1-202ENST00000380518 BVESQ8NE79 360 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 OR2M3Q8NG83 312 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 CHST5Q9GZS9 411 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 LYRM2Q9NU23 88 aaPredicted RBP14.1□□□□□ -0.15
COL2A1-202ENST00000380518 PRR13Q9NZ81 148 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 LIPGQ9Y5X9 500 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 PCM1Q15154 2024 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 CABIN1Q9Y6J0 2220 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 HTR1DP28221 377 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 MAGEA5P43359 124 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 EIF4EBP2Q13542 120 aaPredicted RBP14.1□□□□□ -0.15
COL2A1-202ENST00000380518 BTNL3Q6UXE8 466 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 OR6S1Q8NH40 331 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 DTD1Q8TEA8 209 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 GRAMD2BQ96HH9 432 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 Q9N2K0 584 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 PCDHGA9Q9Y5G4 932 aaKnown RBP14.1□□□□□ -0.15
COL2A1-202ENST00000380518 ACAA2P42765 397 aaKnown RBP14.1□□□□□ -0.15
COL2A1-202ENST00000380518 FAM78BQ5VT40 261 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 BHLHA15Q7RTS1 189 aaPredicted RBP14.1□□□□□ -0.15
COL2A1-202ENST00000380518 C9orf40Q8IXQ3 194 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 PRSS3P2Q8NHM4 247 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 RAB1BQ9H0U4 201 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 TECRQ9NZ01 308 aaKnown RBP14.1□□□□□ -0.15
COL2A1-202ENST00000380518 DOK5Q9P104 306 aa14.1□□□□□ -0.15
COL2A1-202ENST00000380518 TEX50A0A1B0GTY4 177 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 MOSPD3O75425 235 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 IL9P15248 144 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 PMELP40967 661 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 OR11H7Q8NGC8 314 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 OR5A2Q8NGI9 324 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 MRPL24Q96A35 216 aaKnown RBP14.09□□□□□ -0.15
COL2A1-202ENST00000380518 WDR54Q9H977 334 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms