RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 PRDX2P32119 198 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 SIX1Q15475 284 aaPredicted RBP7.81□□□□□ -1.16
LIG3-202ENST00000378526 IER5LQ5T953 404 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 C1QTNF6Q9BXI9 259 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 TMED7-TICAM2A0A0A6YYA0 188 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 A0A1W2PRU2 124 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 H0Y980 276 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 CD22P20273 847 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 FUT3P21217 361 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 TNFSF10P50591 281 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 TMEM215Q68D42 235 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 FAM53AQ6NSI3 398 aaPredicted RBP7.81□□□□□ -1.16
LIG3-202ENST00000378526 SLC25A42Q86VD7 318 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 OR2Z1Q8NG97 314 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 MRAPQ8TCY5 172 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 RHBDD1Q8TEB9 315 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 ORAOV1Q8WV07 137 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 PHLDA1Q8WV24 401 aaPredicted RBP7.81□□□□□ -1.16
LIG3-202ENST00000378526 TXNRD2Q9NNW7 524 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 TIMM10BQ9Y5J6 103 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 TMEM258P61165 79 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 EVX2Q03828 476 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 IBA57Q5T440 356 aaKnown RBP7.81□□□□□ -1.16
LIG3-202ENST00000378526 TXNDC8Q6A555 127 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 OR10AC1Q8NH08 325 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 HHIPQ96QV1 700 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 TAAR3PQ9P1P4 343 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 LGALS1P09382 135 aaKnown RBP7.81□□□□□ -1.16
LIG3-202ENST00000378526 LINC00869P0C866 280 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 MAMSTRQ6ZN01 415 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 ZNF511Q8NB15 262 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 OR10D3Q8NH80 312 aa7.81□□□□□ -1.16
LIG3-202ENST00000378526 MAFAQ8NHW3 353 aaPredicted RBP7.81□□□□□ -1.16
LIG3-202ENST00000378526 DNAJB12Q9NXW2 375 aaKnown RBP7.81□□□□□ -1.16
LIG3-202ENST00000378526 A0A1W2PP11 408 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 TNFSF15O95150 251 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 HPRT1P00492 218 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 ADRA1AP35348 466 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 CMTM8Q8IZV2 173 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 PELI3Q8N2H9 469 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 OR1N1Q8NGS0 311 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 C19orf53Q9UNZ5 99 aaPredicted RBP7.8□□□□□ -1.16
LIG3-202ENST00000378526 KIAA1217Q5T5P2 1943 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 MPDU1O75352 247 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 MEF2BQ02080 365 aaPredicted RBP7.8□□□□□ -1.16
LIG3-202ENST00000378526 FAHD1Q6P587 224 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 TAS1R1Q7RTX1 841 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 RTN4RL1Q86UN2 441 aaPredicted RBP7.8□□□□□ -1.16
LIG3-202ENST00000378526 TMEM45BQ96B21 275 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 HDHD3Q9BSH5 251 aaPredicted RBP7.8□□□□□ -1.16
LIG3-202ENST00000378526 TMX2-CTNND1H3BSU7 103 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 MAS1LP35410 378 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 MYBPHQ13203 477 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 GCSAMLQ5JQS6 135 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 OR10V1Q8NGI7 309 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 SDHCQ99643 169 aaPredicted RBP7.8□□□□□ -1.16
LIG3-202ENST00000378526 AGAP20933 346 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 RGRP47804 291 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 ABHD3Q8WU67 409 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 MS4A6EQ96DS6 147 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 GEMIN7Q9H840 131 aaKnown RBP7.8□□□□□ -1.16
LIG3-202ENST00000378526 A0A1B0GU03 582 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 ATP5LO75964 103 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 CTSDP07339 412 aaPredicted RBP7.8□□□□□ -1.16
LIG3-202ENST00000378526 MUC1P15941 1255 aaPredicted RBP7.8□□□□□ -1.16
LIG3-202ENST00000378526 C2orf88Q9BSF0 95 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 HAPLN2Q9GZV7 340 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 LTN1O94822 1766 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 EXOSC7Q15024 291 aaKnown RBP7.8□□□□□ -1.16
LIG3-202ENST00000378526 C9orf153Q5TBE3 101 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 C1orf140Q5VVS0 124 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 TMEM207Q6UWW9 146 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 VSTM2AQ8TAG5 236 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 ATOH8Q96SQ7 321 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 PBOV1Q9GZY1 135 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 FAM208AQ9UK61 1670 aaKnown RBP7.8□□□□□ -1.16
LIG3-202ENST00000378526 TRAV21A0A0B4J279 112 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 KIR2DS5A0A0G2JLQ3 304 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 A0A0G2JNG1 304 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 KIR2DS3K7RE56 304 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 NTHL1P78549 312 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 KIR2DS5Q14953 304 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 TMEM108Q6UXF1 575 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 TCEAL8Q8IYN2 117 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 PFN4Q8NHR9 129 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 OR51E1Q8TCB6 317 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 DOK4Q8TEW6 326 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 UBE2FQ969M7 185 aa7.8□□□□□ -1.16
LIG3-202ENST00000378526 MROH1Q8NDA8 1641 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 TRAV9-1A0A075B6T8 112 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 DNASE2O00115 360 aaPredicted RBP7.79□□□□□ -1.16
LIG3-202ENST00000378526 RCC1P18754 421 aaPredicted RBP7.79□□□□□ -1.16
LIG3-202ENST00000378526 NHLRC1Q6VVB1 395 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 WDR31Q8NA23 367 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 A0A1W2PRS3 328 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 C7orf71A4D174 169 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 TLCD2A6NGC4 264 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 SOCS7O14512 581 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 IL17FQ96PD4 163 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 SLC25A2Q9BXI2 301 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms