RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 FXYD4P59646 89 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 MC2RQ01718 297 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 SRYQ05066 204 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 FGL1Q08830 312 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 DAZAP2Q15038 168 aaPredicted RBP5.51□□□□□ -1.53
CHD6-202ENST00000373222 VAX1Q5SQQ9 334 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 C10orf128Q5T292 105 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 ABLIM2Q6H8Q1 611 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 LPCAT3Q6P1A2 487 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 OPN5Q6U736 354 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 PEG10Q86TG7 708 aaKnown RBP5.51□□□□□ -1.53
CHD6-202ENST00000373222 SEMA6DQ8NFY4 1073 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 OR2Y1Q8NGV0 311 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 HAS2Q92819 552 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 CPNE2Q96FN4 548 aaPredicted RBP5.51□□□□□ -1.53
CHD6-202ENST00000373222 SLC25A32Q9H2D1 315 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 PLEKHJ1Q9NW61 149 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 IL36RNQ9UBH0 155 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 AK3Q9UIJ7 227 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 WASF3Q9UPY6 502 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 RFNGQ9Y644 331 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 USF3Q68DE3 2245 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 CADP27708 2225 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 ZNF503-AS2A6NEH8 195 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 ZNF716A6NP11 495 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 CDRT15L2A8MXV6 281 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 F8VVB4 439 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 F8VWA3 439 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 NTN3O00634 580 aaPredicted RBP5.51□□□□□ -1.53
CHD6-202ENST00000373222 SGCEO43556 437 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 TLX3O43711 291 aaPredicted RBP5.51□□□□□ -1.53
CHD6-202ENST00000373222 SYNGR3O43761 229 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 SERPINA5P05154 406 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 CRYGSP22914 178 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 NPBWR2P48146 333 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 MLF1P58340 268 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 LSM6P62312 80 aaKnown RBP5.51□□□□□ -1.53
CHD6-202ENST00000373222 PSG4Q00888 419 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 ZNF92Q03936 586 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 ZFP36L1Q07352 338 aaKnown RBP5.51□□□□□ -1.53
CHD6-202ENST00000373222 RIPPLY1Q0D2K3 151 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 C3AR1Q16581 482 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 ZNF239Q16600 458 aaKnown RBP5.51□□□□□ -1.53
CHD6-202ENST00000373222 CEACAM16Q2WEN9 425 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 CHRFAM7AQ494W8 412 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 IGSF11Q5DX21 431 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 RPL7L1Q6DKI1 246 aaKnown RBP5.51□□□□□ -1.53
CHD6-202ENST00000373222 PPP1R32Q7Z5V6 425 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 WDR5BQ86VZ2 330 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 CALHM1Q8IU99 346 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 CBLN2Q8IUK8 224 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 MCEMP1Q8IX19 187 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 OR11L1Q8NGX0 322 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 MRPL24Q96A35 216 aaKnown RBP5.51□□□□□ -1.53
CHD6-202ENST00000373222 C5orf30Q96GV9 206 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 URM1Q9BTM9 101 aaKnown RBP5.51□□□□□ -1.53
CHD6-202ENST00000373222 WDR54Q9H977 334 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 C12orf4Q9NQ89 552 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 SLC39A1Q9NY26 324 aa5.51□□□□□ -1.53
CHD6-202ENST00000373222 NXT1Q9UKK6 140 aaKnown RBP5.51□□□□□ -1.53
CHD6-202ENST00000373222 RIF1Q5UIP0 2472 aaKnown RBP5.51□□□□□ -1.53
CHD6-202ENST00000373222 BSNQ9UPA5 3926 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 TEX13DA0A0J9YY54 714 aaPredicted RBP5.5□□□□□ -1.53
CHD6-202ENST00000373222 A0A0U1RQV5 110 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 LOC102725191A0A1B0GVB3 256 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 TEX22C9J3V5 150 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 IFNL4K9M1U5 179 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 HSPB6O14558 160 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 FAM157CP0CG43 387 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 TDGF1P13385 188 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 TCN2P20062 427 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 CCNOP22674 350 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 HTR5AP47898 357 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 ASCL1P50553 236 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 HIST1H3AP68431 136 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 ZXDAP98168 799 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 RBM39Q14498 530 aaKnown RBP5.5□□□□□ -1.53
CHD6-202ENST00000373222 ZNF169Q14929 603 aaPredicted RBP5.5□□□□□ -1.53
CHD6-202ENST00000373222 MST1LQ2TV78 715 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 PHLDA2Q53GA4 152 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 HIST2H3PS2Q5TEC6 136 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 ZNF585AQ6P3V2 769 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 HIST2H3AQ71DI3 136 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 SKA3Q8IX90 412 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 PUSL1Q8N0Z8 303 aaKnown RBP5.5□□□□□ -1.53
CHD6-202ENST00000373222 ARRDC1Q8N5I2 433 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 CPEB3Q8NE35 698 aaKnown RBP5.5□□□□□ -1.53
CHD6-202ENST00000373222 OR10D3Q8NH80 312 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 LHFPL5Q8TAF8 219 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 EMG1Q92979 244 aaKnown RBP5.5□□□□□ -1.53
CHD6-202ENST00000373222 NAT6Q93015 286 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 S100A13Q99584 98 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 FOXB1Q99853 325 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 HRH4Q9H3N8 390 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 ZDHHC8Q9ULC8 765 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 TNRC6AQ8NDV7 1962 aaKnown RBP5.5□□□□□ -1.53
CHD6-202ENST00000373222 LOC102723971A0A1B0GUV8 181 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 A0A1W2PNU3 283 aaPredicted RBP5.5□□□□□ -1.53
CHD6-202ENST00000373222 OOEPA6NGQ2 149 aa5.5□□□□□ -1.53
CHD6-202ENST00000373222 CEACAM18A8MTB9 384 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms