RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ORC5O43913 435 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 CRTAPO75718 401 aaPredicted RBP7.43□□□□□ -1.22
TPM3-213ENST00000368545 CECR9P0C854 216 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 BMP5P22003 454 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 PTAFRP25105 342 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 PPP1CBP62140 327 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 PRDX4Q13162 271 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 CEACAM21Q3KPI0 293 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 SLC22A6Q4U2R8 563 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 RNASE12Q5GAN4 147 aaKnown RBP7.43□□□□□ -1.22
TPM3-213ENST00000368545 OR10K2Q6IF99 312 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 PLET1Q6UQ28 207 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 PET117Q6UWS5 81 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 Q6ZRM9 215 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 DRAXINQ8NBI3 349 aaPredicted RBP7.43□□□□□ -1.22
TPM3-213ENST00000368545 DUSP18Q8NEJ0 188 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 PXT1Q8NFP0 134 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 OR56B1Q8NGI3 324 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 OR5D18Q8NGL1 313 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 OR52I2Q8NH67 350 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 MUCL1Q96DR8 90 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 FYTTD1Q96QD9 318 aaKnown RBP7.43□□□□□ -1.22
TPM3-213ENST00000368545 BCL2L14Q9BZR8 327 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 METTL9Q9H1A3 318 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 COPZ2Q9P299 210 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 MTFP1Q9UDX5 166 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 ING4Q9UNL4 249 aa7.43□□□□□ -1.22
TPM3-213ENST00000368545 NOP16Q9Y3C1 178 aaKnown RBP7.43□□□□□ -1.22
TPM3-213ENST00000368545 A0A0U1RQK1 487 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 ZNF320A2RRD8 509 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 FUOMA2VDF0 154 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 RBBP9O75884 186 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 ZNF35P13682 527 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 SLC6A1P30531 599 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 FAUP35544 74 aaKnown RBP7.42□□□□□ -1.22
TPM3-213ENST00000368545 CAMPP49913 170 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 BCAP31P51572 246 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 UCP2P55851 309 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 RPS27AP62979 156 aaKnown RBP7.42□□□□□ -1.22
TPM3-213ENST00000368545 KLF9Q13886 244 aaPredicted RBP7.42□□□□□ -1.22
TPM3-213ENST00000368545 ARL6IP1Q15041 203 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 RSU1Q15404 277 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 SERTAD4-AS1Q5TG53 156 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 C11orf88Q6PI97 169 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 PRSS57Q6UWY2 283 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 ZSCAN4Q8NAM6 433 aaPredicted RBP7.42□□□□□ -1.22
TPM3-213ENST00000368545 OR10R2Q8NGX6 335 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 LPAR5Q9H1C0 372 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 IL36GQ9NZH8 169 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 MYEF2Q9P2K5 600 aaKnown RBP7.42□□□□□ -1.22
TPM3-213ENST00000368545 NLKQ9UBE8 527 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 ZNF107Q9UII5 783 aaPredicted RBP7.42□□□□□ -1.22
TPM3-213ENST00000368545 MEMO1Q9Y316 297 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 NBASA2RRP1 2371 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 IGHV1-18A0A0C4DH31 117 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 ANKRD20A5PA0PJZ0 165 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 PQLC2LA1A4F0 135 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 OR5B21A6NL26 309 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 MARCH11A6NNE9 402 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 SSX4O60224 188 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 PFDN1O60925 122 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 MELTFP08582 738 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 SPNP16150 400 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 MGMTP16455 207 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 SERPINA2P20848 420 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 SRP9P49458 86 aaKnown RBP7.42□□□□□ -1.22
TPM3-213ENST00000368545 SNTB2Q13425 540 aaKnown RBP7.42□□□□□ -1.22
TPM3-213ENST00000368545 PPA1Q15181 289 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 ZNF260Q3ZCT1 412 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 ASCL4Q6XD76 172 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 FAM185AQ8N0U4 392 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 TMEM104Q8NE00 496 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 OR5A2Q8NGI9 324 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 OR1J1Q8NGS3 322 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 FAM110DQ8TAY7 271 aaPredicted RBP7.42□□□□□ -1.22
TPM3-213ENST00000368545 GPX8Q8TED1 209 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 AQP3Q92482 292 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 RND1Q92730 232 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 S100PBPQ96BU1 408 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 PPP1R14BQ96C90 147 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 MRPS24Q96EL2 167 aaKnown RBP7.42□□□□□ -1.22
TPM3-213ENST00000368545 GAL3ST1Q99999 423 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 TM2D1Q9BX74 207 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 OR51B6Q9H340 312 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 ELL3Q9HB65 397 aaPredicted RBP7.42□□□□□ -1.22
TPM3-213ENST00000368545 KLK11Q9UBX7 282 aa7.42□□□□□ -1.22
TPM3-213ENST00000368545 NAV3Q8IVL0 2385 aa7.41□□□□□ -1.22
TPM3-213ENST00000368545 IGKV1-27A0A075B6S5 117 aa7.41□□□□□ -1.22
TPM3-213ENST00000368545 IGHV2OR16-5A0A0B4J2B6 119 aa7.41□□□□□ -1.22
TPM3-213ENST00000368545 MEIOCA2RUB1 952 aa7.41□□□□□ -1.22
TPM3-213ENST00000368545 IQCF6A8MYZ5 107 aa7.41□□□□□ -1.22
TPM3-213ENST00000368545 VWC2LB2RUY7 222 aa7.41□□□□□ -1.22
TPM3-213ENST00000368545 CRLF1O75462 422 aa7.41□□□□□ -1.22
TPM3-213ENST00000368545 GTF2F2P13984 249 aa7.41□□□□□ -1.22
TPM3-213ENST00000368545 VEGFCP49767 419 aa7.41□□□□□ -1.22
TPM3-213ENST00000368545 ADORA2A-AS1P86434 159 aa7.41□□□□□ -1.22
TPM3-213ENST00000368545 PDZK1IP1Q13113 114 aa7.41□□□□□ -1.22
TPM3-213ENST00000368545 PCGF3Q3KNV8 242 aa7.41□□□□□ -1.22
TPM3-213ENST00000368545 MOGAT2Q3SYC2 334 aa7.41□□□□□ -1.22
TPM3-213ENST00000368545 DMRTC1Q5HYR2 192 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms