RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 TBX21Q9UL17 535 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 TRAPPC1Q9Y5R8 145 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 PIGBOS1A0A0B4J2F0 54 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 LINC01553A4QN01 128 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 K7ERU9 68 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 LMX1BO60663 402 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 HLA-HP01893 362 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 HOXB2P14652 356 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 ZNF133P52736 654 aaPredicted RBP6.69□□□□□ -1.34
CCR9-201ENST00000355983 FAM53BQ14153 422 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 DNM1P34Q6PK57 102 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 RTN4RL2Q86UN3 420 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 TMEM123Q8N131 208 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 C10orf53Q8N6V4 93 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 OR5C1Q8NGR4 320 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 VSTM2LQ96N03 204 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 CST9LQ9H4G1 147 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 ZNF701Q9NV72 531 aaPredicted RBP6.69□□□□□ -1.34
CCR9-201ENST00000355983 NECAP2Q9NVZ3 263 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 RPH3ALQ9UNE2 315 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 PAM16Q9Y3D7 125 aa6.69□□□□□ -1.34
CCR9-201ENST00000355983 SPTBP11277 2137 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 SAA2-SAA4A0A096LPE2 208 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 CBY3A6NI87 242 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 PRR19A6NJB7 356 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 CCDC85CA6NKD9 419 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 J3QR06 171 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 PRNPP04156 253 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 CCL1P22362 96 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 DYNLT3P51808 116 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 SEC13P55735 322 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 EXOSC7Q15024 291 aaKnown RBP6.68□□□□□ -1.34
CCR9-201ENST00000355983 SHBQ15464 509 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 ABCA11PQ4W5N1 156 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 TRIM61Q5EBN2 209 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 OR4N5Q8IXE1 308 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 ODF3L1Q8IXM7 274 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 TMEM256Q8N2U0 113 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 OR5AU1Q8NGC0 362 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 TMEM56Q96MV1 263 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 TIMM29Q9BSF4 260 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 SLC35D1Q9NTN3 355 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 ANXA10Q9UJ72 324 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 TMEM56-RWDD3S4R434 201 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 SNRNP200O75643 2136 aaKnown RBP6.68□□□□□ -1.34
CCR9-201ENST00000355983 TRAV36DV7A0A075B6V5 113 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 NPIPB13A6NJU9 1138 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 NPIPB4C9JG80 1138 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 AQP7O14520 342 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 MSTNO14793 375 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 MLNRO43193 412 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 SLC16A7O60669 478 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 HYPMO75409 117 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 IFNA5P01569 189 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 STATHP02808 62 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 CTXN2P0C2S0 81 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 CT62P0C5K7 136 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 CTSEP14091 401 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 ZNF20P17024 532 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 TUBG1P23258 451 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 IL3RAP26951 378 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 PEBP1P30086 187 aaKnown RBP6.68□□□□□ -1.34
CCR9-201ENST00000355983 HNRNPA3P51991 378 aaKnown RBP6.68□□□□□ -1.34
CCR9-201ENST00000355983 MEF2BQ02080 365 aaPredicted RBP6.68□□□□□ -1.34
CCR9-201ENST00000355983 ID3Q02535 119 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 COL9A2Q14055 689 aaPredicted RBP6.68□□□□□ -1.34
CCR9-201ENST00000355983 RNPS1Q15287 305 aaKnown RBP6.68□□□□□ -1.34
CCR9-201ENST00000355983 RNF151Q2KHN1 245 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 TMPRSS7Q7RTY8 843 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 MARCH3Q86UD3 253 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 LSRQ86X29 649 aaPredicted RBP6.68□□□□□ -1.34
CCR9-201ENST00000355983 TCEAL8Q8IYN2 117 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 TCTEX1D1Q8N7M0 179 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 Q8N976 141 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 OR52R1Q8NGF1 315 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 PGAM5Q96HS1 289 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 OR10A5Q9H207 317 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 ZNF665Q9H7R5 613 aa6.68□□□□□ -1.34
CCR9-201ENST00000355983 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.68□□□□□ -1.34
CCR9-201ENST00000355983 IGHV2-26A0A0B4J1V2 119 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 OR5B21A6NL26 309 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 RAMP3O60896 148 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 DXOO77932 396 aaKnown RBP6.67□□□□□ -1.34
CCR9-201ENST00000355983 TNFSF15O95150 251 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 C8AP07357 584 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 CCR5P51681 352 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 SUMO1P63165 101 aaKnown RBP6.67□□□□□ -1.34
CCR9-201ENST00000355983 MSMO1Q15800 293 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 PLPPR5Q32ZL2 321 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 TDRG1Q3Y452 100 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 VWA1Q6PCB0 445 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 C12orf76Q8N812 135 aaPredicted RBP6.67□□□□□ -1.34
CCR9-201ENST00000355983 IL22RA2Q969J5 263 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 ADOQ96SZ5 270 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 PBOV1Q9GZY1 135 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 ZFP92A6NM28 416 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 CEBPZOSA8MTT3 80 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 C9orf172C9J069 976 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 ZNF878C9JN71 531 aa6.67□□□□□ -1.34
CCR9-201ENST00000355983 ATXN7O15265 892 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms