RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 ZP1P60852 638 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 RPS23P62266 143 aaKnown RBP5.87□□□□□ -1.47
VPS13A-201ENST00000355766 RPS27AP62979 156 aaKnown RBP5.87□□□□□ -1.47
VPS13A-201ENST00000355766 DEFA6Q01524 100 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 BSPH1Q075Z2 132 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 MZT1Q08AG7 82 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 KLF9Q13886 244 aaPredicted RBP5.87□□□□□ -1.47
VPS13A-201ENST00000355766 UBE2V2Q15819 145 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 GFOD2Q3B7J2 385 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 CEACAM21Q3KPI0 293 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 ACTBL2Q562R1 376 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 MBNL2Q5VZF2 373 aaKnown RBP5.87□□□□□ -1.47
VPS13A-201ENST00000355766 ELP2Q6IA86 826 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 C11orf71Q6IPW1 123 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 ZDHHC23Q8IYP9 409 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 FAM89BQ8N5H3 189 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 C3orf56Q8N813 242 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 SPERTQ8NA61 448 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 OR5A2Q8NGI9 324 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 AQP3Q92482 292 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 SLC7A6Q92536 515 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 S100PBPQ96BU1 408 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 ORAI1Q96D31 301 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 MSI2Q96DH6 328 aaKnown RBP5.87□□□□□ -1.47
VPS13A-201ENST00000355766 BORCS8Q96FH0 119 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 S100A13Q99584 98 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 PLK3Q9H4B4 646 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 AUNIPQ9H7T9 357 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 NOX3Q9HBY0 568 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 NGBQ9NPG2 151 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 C14orf119Q9NWQ9 140 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 MTFP1Q9UDX5 166 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 CACNG2Q9Y698 323 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 PLCE1Q9P212 2302 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 PRKDCP78527 4128 aaKnown RBP5.87□□□□□ -1.47
VPS13A-201ENST00000355766 A0A0B4J203 849 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 PQLC2LA1A4F0 135 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 TMEM210A6NLX4 147 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 CD300LBA8K4G0 201 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 IQCF6A8MYZ5 107 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 SHISA9B4DS77 424 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 PLA2G10O15496 165 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 ORC5O43913 435 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 LYZL6O75951 148 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 KDM4BO94953 1096 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 ACAA1P09110 424 aaPredicted RBP5.86□□□□□ -1.47
VPS13A-201ENST00000355766 PATE4P0C8F1 98 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 ZNF35P13682 527 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 GTF2F2P13984 249 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 KITLGP21583 273 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 PRSS3P35030 304 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 RCVRNP35243 200 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 WNT5AP41221 380 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 RFX2P48378 723 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 FOXG1P55316 489 aaPredicted RBP5.86□□□□□ -1.47
VPS13A-201ENST00000355766 MTCP1P56278 107 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 BTG1P62324 171 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 UNC119Q13432 240 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 C9orf135Q5VTT2 229 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 AGAP6Q5VW22 663 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 PLET1Q6UQ28 207 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 GLIPR1L1Q6UWM5 242 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 CCBE1Q6UXH8 406 aaPredicted RBP5.86□□□□□ -1.47
VPS13A-201ENST00000355766 RFPL4BQ6ZWI9 263 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 GDPD3Q7L5L3 318 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 NRARPQ7Z6K4 114 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 NAA40Q86UY6 237 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 ANGPTL5Q86XS5 388 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 ZNF573Q86YE8 665 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 Q8IYB0 196 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 WDR31Q8NA23 367 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 OR56B2PQ8NGI1 322 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 OR10R2Q8NGX6 335 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 OR2AE1Q8NHA4 323 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 GPX8Q8TED1 209 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 TNFAIP8L1Q8WVP5 186 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 ST8SIA2Q92186 375 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 MUCL1Q96DR8 90 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 HIST1H2AAQ96QV6 131 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 GPER1Q99527 375 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 GAL3ST1Q99999 423 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 MARVELD1Q9BSK0 173 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 SOX7Q9BT81 388 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 MLST8Q9BVC4 326 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 PAPOLGQ9BWT3 736 aaKnown RBP5.86□□□□□ -1.47
VPS13A-201ENST00000355766 PKIBQ9C010 78 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 C11orf54Q9H0W9 315 aaPredicted RBP5.86□□□□□ -1.47
VPS13A-201ENST00000355766 METTL9Q9H1A3 318 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 CISD1Q9NZ45 108 aaKnown RBP5.86□□□□□ -1.47
VPS13A-201ENST00000355766 HSF4Q9ULV5 492 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 ANAPC10Q9UM13 185 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 SPEF1Q9Y4P9 236 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 NUBP2Q9Y5Y2 271 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 SLC25A15Q9Y619 301 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 PKD1L1Q8TDX9 2849 aa5.86□□□□□ -1.47
VPS13A-201ENST00000355766 ANKRD20A5PA0PJZ0 165 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 FOXI3A8MTJ6 420 aaPredicted RBP5.85□□□□□ -1.47
VPS13A-201ENST00000355766 VWC2LB2RUY7 222 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 PRAF2O60831 178 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 RBBP9O75884 186 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms