RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 POLR2GP62487 172 aaKnown RBP eCLIP15.86■□□□□ 0.131e-6■■□□□ 13.6
COL18A1-202ENST00000355480 LSM11P83369 360 aaKnown RBP eCLIP15.86■□□□□ 0.132e-8■■□□□ 11.5
COL18A1-202ENST00000355480 LSMEM1Q8N8F7 131 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 GMPPAQ96IJ6 420 aaPredicted RBP15.86■□□□□ 0.13
COL18A1-202ENST00000355480 COLQQ9Y215 455 aaPredicted RBP15.86■□□□□ 0.13
COL18A1-202ENST00000355480 IGKV3-7A0A075B6H7 116 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 SCO1O75880 301 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 HLXQ14774 488 aaPredicted RBP15.86■□□□□ 0.13
COL18A1-202ENST00000355480 C10orf35Q96D05 121 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 PLAC1Q9HBJ0 212 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 FRRS1LQ9P0K9 344 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 TSPO2Q5TGU0 170 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 DMKNQ6E0U4 476 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-202ENST00000355480 UQCC3Q6UW78 93 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 ASB5Q8WWX0 329 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 UFC1Q9Y3C8 167 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 SOCS1O15524 211 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 CTSDP07339 412 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-202ENST00000355480 HTN1P15515 57 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 ISXQ2M1V0 245 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 INO80CQ6PI98 192 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-202ENST00000355480 RD3LP0DJH9 198 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 FBXW9Q5XUX1 488 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 DGAT2L7PQ6IED9 249 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 PRSS54Q6PEW0 395 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 ZAR1Q86SH2 424 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 C9orf40Q8IXQ3 194 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 TMEM38BQ9NVV0 291 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 CLN8Q9UBY8 286 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 PCOLCE2Q9UKZ9 415 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 A0A1W2PQF6 199 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 KIAA1324LA8MWY0 1029 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-202ENST00000355480 NTN1O95631 604 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 TUSC1Q2TAM9 212 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 TTTY12Q9BZ98 90 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 CES1P1Q9UKY3 287 aa15.85■□□□□ 0.13
COL18A1-202ENST00000355480 IGHV3OR15-7A0A075B7D8 119 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 A0A1W2PPV9 198 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 J3QT63 122 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 NHLH1Q02575 133 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 NHLH2Q02577 135 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 RNF2Q99496 336 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 FBXL17Q9UF56 701 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 MBD1Q9UIS9 605 aaPredicted RBP15.84■□□□□ 0.13
COL18A1-202ENST00000355480 ANKRD20A5PA0PJZ0 165 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 J3QR89 54 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 SEMA7AO75326 666 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 CSF2RBP32927 897 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 RPEL1Q2QD12 228 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 INHBBP09529 407 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 ACP1P24666 158 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 HIST1H3AP68431 136 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 MSL2Q9HCI7 577 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 MMP24Q9Y5R2 645 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 GSTZ1O43708 216 aaPredicted RBP15.84■□□□□ 0.13
COL18A1-202ENST00000355480 RPS4Y1P22090 263 aaKnown RBP15.84■□□□□ 0.13
COL18A1-202ENST00000355480 STPG1Q5TH74 334 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 OR10A7Q8NGE5 316 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 TEX50A0A1B0GTY4 177 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 A0A1W2PNV4 684 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 PMS2CLQ68D20 193 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 OR4D11Q8NGI4 311 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 OR1L1Q8NH94 360 aa15.84■□□□□ 0.13
COL18A1-202ENST00000355480 J3KRW8 73 aa15.83■□□□□ 0.13
COL18A1-202ENST00000355480 SYNGR2O43760 224 aa15.83■□□□□ 0.13
COL18A1-202ENST00000355480 OR5AL1P0C617 328 aa15.83■□□□□ 0.13
COL18A1-202ENST00000355480 DYNLT3P51808 116 aa15.83■□□□□ 0.12
COL18A1-202ENST00000355480 MOGAT2Q3SYC2 334 aa15.83■□□□□ 0.12
COL18A1-202ENST00000355480 RSRP1Q9BUV0 290 aa15.83■□□□□ 0.12
COL18A1-202ENST00000355480 IGHV4-34P06331 123 aa15.83■□□□□ 0.12
COL18A1-202ENST00000355480 USF1P22415 310 aaPredicted RBP15.83■□□□□ 0.12
COL18A1-202ENST00000355480 IL24Q13007 206 aa15.83■□□□□ 0.12
COL18A1-202ENST00000355480 RBM14Q96PK6 669 aaKnown RBP15.83■□□□□ 0.12
COL18A1-202ENST00000355480 FCN1O00602 326 aa15.83■□□□□ 0.12
COL18A1-202ENST00000355480 ADAP1O75689 374 aa15.83■□□□□ 0.12
COL18A1-202ENST00000355480 HNRNPA3P51991 378 aaKnown RBP15.83■□□□□ 0.12
COL18A1-202ENST00000355480 MDP1Q86V88 176 aa15.83■□□□□ 0.12
COL18A1-202ENST00000355480 GAPTQ8N292 157 aa15.83■□□□□ 0.12
COL18A1-202ENST00000355480 FLYWCH2Q96CP2 140 aaKnown RBP15.83■□□□□ 0.12
COL18A1-202ENST00000355480 SLC7A10Q9NS82 523 aa15.83■□□□□ 0.12
COL18A1-202ENST00000355480 CLDN34H7C241 214 aa15.83■□□□□ 0.12
COL18A1-202ENST00000355480 NQO2P16083 231 aa15.83■□□□□ 0.12
COL18A1-202ENST00000355480 G0S2P27469 103 aa15.83■□□□□ 0.12
COL18A1-202ENST00000355480 CLEC9AQ6UXN8 241 aa15.83■□□□□ 0.12
COL18A1-202ENST00000355480 DUSP18Q8NEJ0 188 aa15.83■□□□□ 0.12
COL18A1-202ENST00000355480 TECRQ9NZ01 308 aaKnown RBP15.83■□□□□ 0.12
COL18A1-202ENST00000355480 PRR13Q9NZ81 148 aa15.83■□□□□ 0.12
COL18A1-202ENST00000355480 MYO5AQ9Y4I1 1855 aaKnown RBP15.82■□□□□ 0.12
COL18A1-202ENST00000355480 BGLAPP02818 100 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 CAMPP49913 170 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 RPL30P62888 115 aaKnown RBP15.82■□□□□ 0.12
COL18A1-202ENST00000355480 OR4D10Q8NGI6 311 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 VAMP8Q9BV40 100 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 PHOX2AO14813 284 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 OGG1O15527 345 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 RAG2P55895 527 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 DTD1Q8TEA8 209 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 FGF11Q92914 225 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 ATP5SQ99766 215 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 HLA-GP17693 338 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms