RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 MOB1BQ7L9L4 216 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 CMTM3Q96MX0 182 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 TPPP3Q9BW30 176 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 CISD1Q9NZ45 108 aaKnown RBP11.91□□□□□ -0.5
SMC6-201ENST00000351948 KLK13Q9UKR3 277 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 A1L4Q6 167 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 PXT1Q8NFP0 134 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 OR5D13Q8NGL4 314 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 GAL3ST2Q9H3Q3 398 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 TMEM229AB2RXF0 380 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 ITLN1Q8WWA0 313 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 DAZAP1Q96EP5 407 aaKnown RBP11.9□□□□□ -0.5
SMC6-201ENST00000351948 CCL13Q99616 98 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 OR5H1A6NKK0 313 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 TMEM127O75204 238 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 NAT2P11245 290 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 PMELP40967 661 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 TMEM123Q8N131 208 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 TMEM231Q9H6L2 316 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 E5RGE8 158 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 SYNGR1O43759 233 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 DHODHQ02127 395 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 LY6DQ14210 128 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 LAMP3Q9UQV4 416 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 NSG2Q9Y328 171 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 ANKRD20A5PA0PJZ0 165 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 A8MXE2 369 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 GYPAP02724 150 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 CLEC3BP05452 202 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 OR4A8P0C604 315 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 REG1BP48304 166 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 TMEM267Q0VDI3 215 aaPredicted RBP11.9□□□□□ -0.5
SMC6-201ENST00000351948 MRGPRGQ86SM5 289 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 C20orf24Q9BUV8 137 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 OR6C3Q9NZP0 311 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 CACNG5Q9UF02 275 aa11.9□□□□□ -0.5
SMC6-201ENST00000351948 RALYQ9UKM9 306 aaKnown RBP11.9□□□□□ -0.5
SMC6-201ENST00000351948 C3orf85A0A1B0GTC6 90 aa11.9□□□□□ -0.51
SMC6-201ENST00000351948 APELAP0DMC3 54 aa11.9□□□□□ -0.51
SMC6-201ENST00000351948 HAGHQ16775 308 aa11.9□□□□□ -0.51
SMC6-201ENST00000351948 TOR2AQ5JU69 321 aa11.9□□□□□ -0.51
SMC6-201ENST00000351948 NSUN5P2Q63ZY6 315 aa11.9□□□□□ -0.51
SMC6-201ENST00000351948 FAM122BQ7Z309 247 aa11.9□□□□□ -0.51
SMC6-201ENST00000351948 PGLYRP3Q96LB9 341 aa11.9□□□□□ -0.51
SMC6-201ENST00000351948 WNT5BQ9H1J7 359 aa11.9□□□□□ -0.51
SMC6-201ENST00000351948 ABCA4P78363 2273 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 MED19A0JLT2 244 aaPredicted RBP11.89□□□□□ -0.51
SMC6-201ENST00000351948 CRYZL1O95825 349 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 SULT1A3P0DMM9 295 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 SULT1A4P0DMN0 295 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 UBE2KP61086 200 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 CD300CQ08708 224 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 C17orf82Q86X59 251 aaPredicted RBP11.89□□□□□ -0.51
SMC6-201ENST00000351948 TMEM171Q8WVE6 324 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 CCL28Q9NRJ3 127 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 ZMIZ1Q9ULJ6 1067 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 PDGFAP04085 211 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 H2AFB1P0C5Y9 115 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 HTD2P86397 168 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 IL36GQ9NZH8 169 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 PINLYPA6NC86 204 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 MGST1P10620 155 aaKnown RBP11.89□□□□□ -0.51
SMC6-201ENST00000351948 MDH2P40926 338 aaKnown RBP11.89□□□□□ -0.51
SMC6-201ENST00000351948 CLN8Q9UBY8 286 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 NEUROG3Q9Y4Z2 214 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 MRPS11P82912 194 aaKnown RBP11.89□□□□□ -0.51
SMC6-201ENST00000351948 ROM1Q03395 351 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 KLRB1Q12918 225 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 MOGAT2Q3SYC2 334 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 SOHLH1Q5JUK2 328 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 CLEC9AQ6UXN8 241 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 OR8B3Q8NGG8 313 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 OR8B2Q96RD0 313 aa11.89□□□□□ -0.51
SMC6-201ENST00000351948 UBE2L5PA0A1B0GUS4 154 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 C9orf170A2RU37 121 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 CMTM2Q8TAZ6 248 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 UHRF2Q96PU4 802 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 GNG13Q9P2W3 67 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 OR7C2O60412 319 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 ADRB1P08588 477 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 TRAPPC2P0DI81 140 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 TRAPPC2BP0DI82 140 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 COL10A1Q03692 680 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 OR2F1Q13607 317 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 VMA21Q3ZAQ7 101 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 GAPTQ8N292 157 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 C10orf35Q96D05 121 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 KLHDC3Q9BQ90 382 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 PCGF1Q9BSM1 259 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 TRDCB7Z8K6 153 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 PPP1CCP36873 323 aaKnown RBP11.88□□□□□ -0.51
SMC6-201ENST00000351948 RAB32Q13637 225 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 ZNF79Q15937 498 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 SPACA3Q8IXA5 215 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 OR4D10Q8NGI6 311 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 LILRB4Q8NHJ6 448 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 SLC25A32Q9H2D1 315 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 A0A0U1RQV5 110 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 HBE1P02100 147 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 SCAND1P57086 179 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms